Quercus suber (cork oak): 112006296
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Entry
112006296 CDS
T05868
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC112006296
KO
K13091
RNA-binding protein 23/39
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qsu03041
]
112006296
Spliceosome [BR:
qsu03041
]
Common components
Common spliceosomal components
General mRNP proteins
112006296
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
NRP1_C
RRM_8
RRM_7
Motif
Other DBs
NCBI-GeneID:
112006296
NCBI-ProteinID:
XP_065626112
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MDFDAYDYLEKTVENPEPGKEKEGAVNGGGEIEKSGNKERSRSSKHKSDERDDDVERRSK
RSRSEDESRDRDRDRQRERGSSRHRSRSRDGERDRHRSGREQRDKERDRDREERNGNVKE
RDRDREKERGRDRDRERDRRERDRENEKEKEREKERSRRSRSESERQRGERDEREKSRDK
ELKERERERESRERDRESRYGRAIFRWSFWQLGQAQEQVMGFRLSPGLYLGSAFLHIVEN
NLLPFWDCSFLPFRLQSRRYKEKKEEVAEPEADPERDQRTVFAYQICLKANERDVYEFFS
KAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGLPLLGQPVMVKPSEAEKNL
VQSTTAVAGVSGGLIGPYSGGARRLYVGNLHYNITEADLRQVFEAFGQVELVQLPVDETG
RCKGYGFVQFACLEDARNALSLNQQLEIACQLIKVSALTDQAGMQDVGANSGDFDNDEGG
GLSLNAXSRALLMQKLDRSGSGSSVAGSAGTPVVNSTGLTLPTVPILGAAPAVSPITPLV
PALAGLGGSGLQVPIATLPTVDTIGVPXECLLLKDMFDPNDEYPPLQTEPDFELDIKEDV
QNECLKFGKLKHIFLDK
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggattttgacgcgtatgattatttagagaaaactgttgagaatcctgagccagggaaa
gagaaggaaggtgcagttaatggaggtggtgaaattgagaagtctggtaataaagagcgt
agtcggagttcgaagcataagagtgatgagagggatgatgatgtggagcggcgttcaaag
cgttcgagatcagaagatgagtcgcgtgatcgcgatcgtgacagacaaagagagaggggt
tcatctcgtcaccgttcacggtctagagatggggaacgggatcgacataggagtgggcgg
gaacaaagggataaggagagagatagggatagagaagagaggaatgggaatgtgaaggag
agagacagggatagggagaaagagcgggggcgagatcgtgatcgagaaagagataggagg
gaacgtgaccgcgagaatgagaaggaaaaagagagagagaaagaacggtcccgtagaagc
aggagtgaatcagaaagacagcggggtgagcgtgatgaaagggagaagagtcgtgacaag
gagctcaaagaaagagaaagggagagagagtcaagggaacgggacagagaaagcagatat
ggtagagcaatcttcagatggtctttctggcaattgggccaggcacaggaacaggtcatg
ggttttcgtctttctccaggactatacttgggttcggcctttttacacatagtggagaat
aatttgctgccattttgggattgttcttttcttccttttcgtttgcaatcaagacgatat
aaagaaaaaaaggaggaagtggctgaaccagaggctgaccctgaacgggatcagaggacc
gtatttgcttaccagatttgtttgaaggcaaatgaaagagatgtgtatgagttcttctca
aaggctggcaaggttcgagatgtacgccttataatggaccgcaattcaagacgatccaag
ggagttggttatattgagttctatgatgcaatgtcagtacctatggcaatagcactctct
ggtcttcctcttcttggtcaaccagttatggtaaaaccatcagaagcagaaaagaatctg
gtccagtcaactacagcagtggctggtgtatcaggtgggcttataggcccctattcagga
ggggccagaaggctgtatgttgggaatctgcattacaacataactgaagctgatcttcgt
caggtttttgaagcatttggtcaagtagagctggtgcagttgcctgttgatgaaactgga
cgttgcaaaggatatggctttgtccagtttgcatgtcttgaagatgctagaaatgcactg
agtctgaatcaacagttggagattgcgtgtcagcttatcaaggtttcagctcttactgat
caagctggaatgcaagatgttggagcaaattctggtgattttgataatgatgaaggaggt
ggcttgtctctgaatgcatgatctcgagcacttctcatgcagaagttggaccgcagtggc
tctggatctagcgttgctggttctgctggcactccagttgtcaatagcacaggccttact
ttaccaacagtgcctattctaggagctgcacctgcagtatctccaattactccccttgtt
cctgctcttgctggacttggtggttcaggtcttcaagttcccattgctactttgccaact
gttgatacaattggtgttccangtgaatgtttattattgaaggatatgtttgatccaaat
gatgagtatccccctttgcaaacggaacctgattttgagttggatatcaaagaagatgtt
caaaatgaatgtttgaagtttggaaaattgaaacatatatttttagacaagtaa
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