KEGG   Quercus suber (cork oak): 112006547
Entry
112006547         CDS       T05868                                 
Name
(RefSeq) uncharacterized protein LOC112006547
  KO
K11096  small nuclear ribonucleoprotein D2
Organism
qsu  Quercus suber (cork oak)
Pathway
qsu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:qsu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112006547
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:qsu03041]
    112006547
   03032 DNA replication proteins [BR:qsu03032]
    112006547
Spliceosome [BR:qsu03041]
 Complex A
  U1 snRNP components
   Sm proteins
    112006547
  U2 snRNP components
    112006547
 Complex B
  U1 snRNP components
    112006547
  U4/U6.U5 tri-snRNP components
    112006547
 Complex C
  U2 snRNP components
    112006547
DNA replication proteins [BR:qsu03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     112006547
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 112006547
NCBI-ProteinID: XP_023894596
LinkDB
Position
Unknown
AA seq 109 aa
MSKPMDEDTTGGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNM
VLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK
NT seq 330 nt   +upstreamnt  +downstreamnt
atgagtaagccaatggatgaggataccactggaggcaagaatgaggaagaggaattcaac
actgggccactctctgttctgatgatgagtgttaagaataacacacaggtgctcattaac
tgccgaaacaacaagaagcttctaggtcgtgtgagggcatttgatcgtcactgtaacatg
gttcttgaaaatgtcagggagatgtggactgaggtaccaaagactggtaaaggcaagaag
aaagctcaacctgtcaacaaagataggtttatcagtaagatgtttcttcggggagactct
gttatcatcgttcttaggaacccaaagtga

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