Quercus suber (cork oak): 112006745
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Entry
112006745 CDS
T05868
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC112006745
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
qsu03016
]
112006745
Enzymes [BR:
qsu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
112006745
Transfer RNA biogenesis [BR:
qsu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
112006745
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
Motif
Other DBs
NCBI-GeneID:
112006745
NCBI-ProteinID:
XP_065619820
LinkDB
All DBs
Position
Unknown
AA seq
572 aa
AA seq
DB search
MANANVNTNNTEAVHVSIDSEAAHVISAVEECHDDDDVGALHDVVQALPSHAVKDLLSAG
VCTRCILWLFGIRGNIYSISAISPSILNLVIGEQRHDEDISSNSKESEFEEVLCALCLGI
LQFTYCDDKEIPVKKGSANMAVAISELVKREGYQIDSFSLEVSVPPIIPENEHSVRLYVK
RKYGTEHWFQGXAISQSISVEDALKFSLAKPLETLLDCKSGISNFHICLTFSHKASKMVW
NVAVSKQGCKRIKTGNSVDSLDDSVAGDMKCSDLADATVERFFDGLQDNESSECFKFPLE
KVNDVCHLVLLCQRIPIYFGGRYLKYSRNVSQTGWIIDDERMGEASVEEIIGSNIQTLCQ
GDNYKFHAAAGEDIDVRMLGSGRPFLVEVQNARQIPSEAFVRKIETYINNLENKLVGVKN
LEVVGIEGWTMMREGEAEKQKQYAALVWILRPLEDVDLDSISSLKDMQILQGTPIRVLHR
RSPLQREKIIHWMKIERISGSSQYFLLHLCTQAGTYIKEFVHGDLGRTHPSIGSILGCRA
EILQLDVTDVKMDCFFYRMRNYALLCVSESIQ
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgcgaacgtgaacacgaacaataccgaagctgtgcacgttagcatcgattcc
gaggcggcgcatgttatctccgccgtcgaggaatgccacgacgacgacgatgtgggggct
ctacacgacgtcgttcaagcattgccttctcacgccgtgaaggacttgttgtccgccggg
gtatgcacccgatgtatcctttggctatttgggatccggggaaatatttattcaatttct
gcaatctcaccatcaatattgaatttagttattggagaacaaagacatgatgaggacatc
agttccaattctaaggaatcagaatttgaggaagtactctgcgccctttgtttaggtatt
ttgcagttcacctattgcgatgacaaggaaattccagtgaaaaaaggaagtgctaatatg
gctgttgcaatttctgagctggtgaagcgagagggctatcagattgatagcttttctctt
gaagtgtccgtacctccaattatccctgaaaatgaacactcagttaggttgtacgtgaaa
agaaagtatgggactgaacattggttccaaggangggccatttctcaaagtatatctgta
gaggatgccttaaaattctctttagcaaaacctcttgaaacattgttggattgtaaatca
ggtataagcaatttccacatctgtttgacattttctcacaaagcttcgaaaatggtttgg
aatgtagcagtgagcaaacagggttgcaagagaataaaaacaggaaacagtgtcgactct
cttgatgactcagtagctggggacatgaaatgctctgatttagctgacgcaactgttgaa
aggttttttgatggtttgcaagataatgaatcttccgagtgcttcaaattccctttagag
aaggtcaatgacgtatgccacttggtgcttctttgccaaaggatacccatctactttggt
gggagatatctgaagtactcaagaaatgtgagtcaaacaggatggatcattgatgatgaa
agaatgggagaagcatctgttgaggagataataggtagcaacatccaaactctgtgtcaa
ggtgacaattataagtttcatgctgctgcaggagaggatatcgatgttcgaatgttgggt
tcaggtaggcctttcctggttgaggtacaaaatgcacgccaaataccatctgaggcattt
gtaagaaaaatagaaacatacataaacaatttggaaaataaattggttggggtaaaaaat
ttggaagttgtaggcattgaggggtggaccatgatgcgtgaaggagaagcagagaagcag
aagcagtatgctgcgcttgtgtggattttgcgaccactcgaggatgtagacttggactct
atatcctcactcaaggacatgcaaattttgcaggggacccctataagggtgcttcaccgt
cgtagtccattacaacgtgaaaaaattatacattggatgaaaattgagaggattagtgga
agttctcaatattttcttttgcatctatgcactcaggctggaacatatattaaggagttt
gtccatggtgatcttggccgtacacatcctagtattggatcaatcctaggttgcagagca
gagattctacaacttgatgttacagatgtgaaaatggactgttttttttacagaatgagg
aactatgctttattgtgtgtctccgaatcaatccagtga
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