KEGG   Quercus suber (cork oak): 112006948
Entry
112006948         CDS       T05868                                 
Name
(RefSeq) uncharacterized protein LOC112006948 isoform X1
  KO
K10801  methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
qsu  Quercus suber (cork oak)
Pathway
qsu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:qsu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    112006948
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:qsu03036]
    112006948
   03400 DNA repair and recombination proteins [BR:qsu03400]
    112006948
Chromosome and associated proteins [BR:qsu03036]
 Eukaryotic type
  Heterochromatin formation proteins
   MBPs (metylated DNA binding proteins)
    112006948
DNA repair and recombination proteins [BR:qsu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     112006948
SSDB
Motif
Pfam: HhH-GPD LiaF-like_C
Other DBs
NCBI-GeneID: 112006948
NCBI-ProteinID: XP_023895037
LinkDB
Position
Unknown
AA seq 699 aa
MSSETEETAAMASLGMKKRKKYRSQSQSQSPMIMTTSAVSSLDSSASQLHTHENVYSSRK
IINNNKLDVPNNKSVQVEEESFIIEKRKSNNRGRRGGKNRVVVLSPYFANQQQRQSSEIA
KGRRKDEDHKMESDYSPVEGSLQNEILKLEDLLSQCTYKTKDDGGRNVAAEVENGLPTIY
ANLKEDQLQLQQTGLEIGKLSHSKRRRRNEKQQAIAPVHIRKVSPYFANEGGPTIRNKNT
VISKHSRGDGDPRKDKKRKDDRISKECTKSNEILGFEKAVLIDEDVGLTEGFDGNAKGRR
KDSRHYTRDFHKIVVKDEEREMEDEEQKMELDYKIKRRTSPFEGSLQNEDLKLEDVLSQY
TYRSHDMTKNGKNGQHDEEQEKKCSEKLSFPFEMTNNSSGLPDDGGRNLAGKVENEAVIL
PSIHTNLKAEQVPQNGLEIGKVSLSKWRRRNEKQQAIAHVEIRKVSPYFWRSTGQVVRND
GHGTKKRKPPRRCARTHATSVRVSPYFQKISKEEENEDGHLLEGSNGFKKPVAIKTVLSS
SEKLADAYRRKSPDNMWKPPRTTPGLLQERHAHDPWRVLVICMLLNRTTGFQARRVISNL
FTLCPDAKTATEVAKEEIEKIIKTLGLQKKRASMIQRLSREYMGESWTHVTQLHGVGKYA
ADAYAIFCTGKWDQVRPNDHMLNHYWKFLKDRERKRGLI
NT seq 2100 nt   +upstreamnt  +downstreamnt
atgtcgtcggaaacagaagaaacggcggcgatggcgtcgttgggtatgaagaaaaggaaa
aagtatcggtctcagtctcagtctcagtctccgatgatcatgacaacctccgccgtaagt
tctctcgattcctctgcatctcaattacatacccatgagaatgtttattcttctaggaaa
atcatcaacaacaataagcttgatgttccaaataataagagtgtacaagtagaagaagag
tcctttattattgagaaaagaaaatcgaataatagaggtagacgaggaggtaagaatagg
gttgtggtgctttctccttattttgctaatcaacaacaacgacagtcgagtgagattgcc
aaggggagacgaaaggatgaagatcataaaatggagtccgattacagtccagttgaggga
agtttgcaaaatgagattttaaagcttgaagatctcctctcacaatgcacttacaagaca
aaggatgatggtggcaggaacgtagctgcggaggttgagaatgggttaccaaccatttat
gctaacttgaaagaagaccaattgcaattgcagcaaactgggttagaaattggaaagctt
tctcattccaagcgcaggagaagaaatgaaaaacagcaagcaatagctcctgttcatatt
cgaaaggtctccccttactttgcaaatgaaggaggacccaccattcgcaacaaaaacact
gtaatatcaaagcatagtagaggtgacggtgacccaaggaaggataagaagagaaaggat
gatagaattagtaaggagtgtaccaagtctaatgagatactggggtttgagaaagccgtt
ttaatagatgaggatgtaggtttaactgaaggttttgatggtaatgccaaggggagaaga
aaggatagcaggcattacacgcgggattttcacaaaatagtagttaaagatgaggagagg
gagatggaggatgaagagcaaaaaatggagttagattacaaaataaaacgtaggactagt
ccatttgagggaagtttacaaaatgaggatttgaagcttgaggatgttctgtcacaatac
acttacaggagtcatgatatgacaaagaacggaaagaatggccagcatgatgaggagcaa
gagaagaaatgtagcgagaaacttagtttcccatttgagatgacaaacaattcatccggt
ctacctgatgatggtggcaggaacttggctgggaaggttgagaatgaggctgttatattg
ccaagcattcatacaaacttgaaagcagagcaagtgccgcaaaatgggttagaaattgga
aaagtttctctttccaagtggaggagaagaaatgaaaaacagcaagcaatagctcatgtt
gaaattcgaaaggtctccccttacttctggaggtcaacgggacaggtggtaagaaatgat
ggtcatggtacaaaaaaaaggaaaccaccaagacgttgtgcaagaactcatgctacttct
gtgagggtctcaccctacttccaaaagatatccaaagaagaagaaaatgaagatggccat
ttgttggaaggtagcaatggatttaaaaaacctgttgcaattaagactgttctttcttct
tctgagaagctagccgatgcataccgaagaaaaagtccagataacatgtggaagcctccg
cgcaccacacctggtctactccaagagcgtcatgcccatgatccttggagggtattggtg
atatgtatgcttctaaatcggacaactggttttcaggctagaagggttatatcgaatctc
tttactctttgtcctgatgcaaagacagcaactgaggttgccaaagaggaaatagaaaag
attataaaaactctaggtctacaaaagaagagggcttcgatgatacaacgcttgtctcgg
gagtatatgggggaaagctggacccatgtgactcagctgcatggtgttggcaagtatgca
gctgatgcgtacgcaatattttgtacaggaaagtgggaccaggtaaggcctaatgatcat
atgctaaatcattattggaaatttctcaaagatagagagagaaagagaggactgatctga

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