Quercus suber (cork oak): 112007041
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Entry
112007041 CDS
T05868
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu00040
Pentose and glucuronate interconversions
qsu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112007041
Enzymes [BR:
qsu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
112007041
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
112007041
NCBI-ProteinID:
XP_023895125
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All DBs
Position
Unknown
AA seq
403 aa
AA seq
DB search
MSRLSLLLLIFIYILTPSFVFASPVQDPDLVVHEVHRSINASRRNLGYLSCGTGNPIDDC
WRCDPSWDKNRQRLADCAIGFGKNAIGGRNGHIYVVTDSSDDDAVNPKPGTLRHAVIQDE
PLWIIFKRDMVIKLKQELVMNSFKTIDGRGASVHIAGGPCITIHRVTNIIIHGINIHDCK
QGGNADIRDSPHHYGWWTVSDGDGVSIFGGKHIWVDHCSLSNCHDGLIDAVHGSTAITIS
NNYMTHHDKVMLLGHSDSFTQDKDMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW
EMYAIGGSADPTIYSQGNRFLAPDDRSKKEVTKHEVASESEWKHWNWRSEGDLLLNGAYF
RQSGAGASSSYARAYSLSARPSTLVGSMTMTAGSLNCRKGSRC
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtctttctcttttgcttcttatcttcatctacattctaaccccaagttttgtt
ttcgcatcaccagtacaagacccagatcttgttgtacatgaagtacacaggagcatcaat
gcctctaggaggaacttgggatatttatcttgtggaacaggtaaccccattgatgattgt
tggcgttgtgaccccagttgggacaagaatcgccagagattagctgattgtgccattggt
tttggtaagaacgcaattggaggaagaaatggccacatctacgtggtcactgactctagt
gatgatgatgccgtgaaccccaaaccgggtactctacgacatgccgttatacaagatgaa
cccttgtggattatcttcaaaagggacatggtaattaagcttaagcaagagctagtgatg
aactctttcaagaccattgatggtaggggtgctagtgttcacattgctggagggccatgc
attaccatacatcgtgttactaatatcatcatccatggtatcaatattcatgattgtaag
caaggaggcaatgctgacataagagactcccctcatcactatggctggtggacagtatcg
gatggtgatggggtgtccatctttggagggaagcacatatgggtggatcattgctcattg
tctaattgccatgatggtctcatagatgccgtccatggatctacggccatcaccatctcc
aacaattacatgactcatcatgacaaggtcatgcttttaggccacagtgattccttcaca
caagataaagacatgcaagttactgtagcctttaatcattttggagaagggctagtgcaa
agaatgccaaggtgtagacatgggtattttcatgtagtgaacaatgactacactcactgg
gaaatgtatgctattggagggagtgctgaccctactatctacagccaaggcaatagattt
cttgcacctgatgacaggtctaagaaagaggtgaccaagcacgaggttgcatcagagagt
gaatggaagcactggaactggaggtccgaaggggatttgctgttgaacggagcatacttc
cggcagtcgggagcaggtgcatcttctagctatgctagggcatatagcctgagtgcaaga
ccatctactctggtgggctcaatgaccatgactgctggttcacttaattgtaggaaaggt
tcccgctgctaa
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