Quercus suber (cork oak): 112007060
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Entry
112007060 CDS
T05868
Name
(RefSeq) U3 snoRNP-associated protein-like EMB2271
KO
K14793
ribosomal RNA-processing protein 9
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
qsu03009
]
112007060
Ribosome biogenesis [BR:
qsu03009
]
Eukaryotic type
90S particles
Other 90S particles
112007060
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_SPT8
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
112007060
NCBI-ProteinID:
XP_065615622
LinkDB
All DBs
Position
Unknown
AA seq
526 aa
AA seq
DB search
MKKKVSAAPRGGGGGRGRGGRGRGGARKDEKFSEDSFFMAESKKRRKIVDDADVIDSGES
DDERGYGFRGGSDGEDDGGDVETADEVRQRVAMAQLDKYRRIAKEEEDEDDEDDSDEGID
RVGEKEGLRDSLVAKILQQEQLEESGRVRRAMASRVQKPKASGGFKVLLKHRQSVTAVAL
SEDDSRGFSASKDGNILHWDVESGKREKYQWPSDDVIRSHGAKDPQGSAKKHSRNVLALA
VSSDGRYLATGGLDRHVHLWDTRTRGHIQAFPGHRGSVSCLTFRQGTSELFSGSFDRTVK
IWNAEDRAYMNTLFGHQSEVLSIDCLRKERVLTVGRDRSMQLFKVPEESRLVFRAPASSL
ECCCFVSNDEFLSGSDDGSIELWTMLRKKPAHIVKNAHPLLAENKNLDQKNSEIIPNGHI
ENGNHNESYHCQSAYSWVSSVTVCRNSDLAASGAGNGSVRLWDIESETKDVRPLFDLPLV
GFVNSLAFAKSGQFLVAGVGQEPRLGRWGCIKSAQNGIAVHSLKLS
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaaagtgtctgcggctccaagaggaggaggaggaggaagaggaagaggaggt
agaggaagaggaggggcaagaaaggacgagaaattttcggaggattcgtttttcatggcg
gaatcgaagaagcggcggaagattgtggacgatgccgacgtgatagacagcggcgagtcg
gacgatgagaggggctatggattccgcggcggttccgatggggaagatgacggcggcgat
gttgagaccgccgacgaggtgaggcagcgcgtggctatggcacagttggataagtatcgt
agaattgctaaggaagaagaggacgaagacgatgaggacgacagcgatgaagggatcgat
agggtaggcgagaaggaaggcctcagggactcgcttgtcgcgaaaattttgcagcaggag
cagctggaagagagtggccgtgttcgccgagctatggcctctagggtacaaaagccgaaa
gctagtggtgggttcaaagtgttattgaagcacagacaatctgtaactgctgtggcatta
tcagaggatgactcgaggggcttttcagcttccaaggatggcaacattttgcattgggat
gtagaaagtgggaaacgcgaaaaataccaatggcctagtgacgatgtaataaggtcccat
ggagccaaggatccacaaggttcagctaagaagcatagtagaaatgttttagcactagct
gttagctctgatggtcggtatttggctactggaggattagatcgccatgttcatttgtgg
gatacccgtacacgaggccatattcaggcctttccaggtcacagaggatctgtatcatgt
ttaacctttaggcaagggacttcagaacttttctctggttcatttgatcgaacagtcaag
atatggaatgcagaagacagagcctacatgaatacattatttggccaccaaagtgaagta
ttatctatcgattgtttacggaaagaacgggtgttgactgttggacgagatcgaagcatg
cagttgtttaaggtccctgaggagtcacgtttagtatttcgtgcccctgcatcttctctg
gagtgttgttgttttgttagtaatgatgaattcttatctggctctgatgatggaagtatt
gagctttggaccatgttgcgaaagaagcctgcacacattgtaaagaatgctcatccttta
ttggctgaaaacaagaatctcgatcaaaagaacagtgaaataatccctaatggacatata
gaaaatggtaaccataatgaaagctatcattgtcaatcagcatattcctgggttagttcc
gtcactgtatgtagaaacagtgatcttgctgcatcaggagccggtaatggttctgttcga
ttatgggatattgaaagtgagaccaaggacgttcgacccttgtttgaccttccattggtt
ggatttgtgaattccttagcttttgcaaaatctggacagtttctggttgctggagttggg
caggaacctcgtttgggaaggtggggatgtatcaaatctgctcagaatggaattgcagtt
cattcccttaagctctcataa
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integrated database retrieval system
