Quercus suber (cork oak): 112007104 Help Entry 112007104         CDS       T05868                                  Name (RefSeq) DNA damage-binding protein 1a   KO K10610   DNA damage-binding protein 1 Organism qsu  Quercus suber (cork oak) Pathway qsu03420   Nucleotide excision repair qsu04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:qsu00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     112007104   09124 Replication and repair    03420 Nucleotide excision repair     112007104  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:qsu04121]     112007104    03400 DNA repair and recombination proteins [BR:qsu03400]     112007104 Ubiquitin system [BR:qsu04121]  Ubiquitin ligases (E3)   Multi subunit Ring-finger type E3    Cul4 complex     Adoptor protein      112007104 DNA repair and recombination proteins [BR:qsu03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      Cul4-DDB2 complex       112007104     TCR (transcription coupled repair) factors      Cul4-CSA complex       112007104 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  MMS1_N CPSF_A Motif Other DBs NCBI-GeneID:  112007104 NCBI-ProteinID:  XP_023895175 LinkDB All DBs Position Unknown AA seq 1089 aa AA seqDB search MSIWNYVVTAHKPTNVNHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAETSELITRAMGDVSDRIGRPTDNGQI GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVL YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGANLLIPVPPPLCGVIIIGEETIVYC SANAFKAIPIRPSITRAYGRVDADGSRYLLGDHTGLLHLLVITHEKEKVTGLKIELLGET SIASTISYLDNAFVYIGSSYGDSQLVKLNLHPDAKGSYVEVLERYVNLGPIVDFCVVDLE RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS FISETRILAMNIEDELEETEIEGFCSQVQTLFCHDAVFNQLVQVTSSSVRLVSSTSRELR NEWNARPGYSINVATANATQVLLATGGGHLVYLEIGDGVLTEVKHAQLEYEISCLDINPI GENPNYSQLAAVGMWTDISVRIFSLPDLNLITKEPLGGEIIPRSVLLCVFEGISYLLCAL GDGHLLNFLLNTSTGELADRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICH QEQSRTFAICSLKSNQSSTEDSETHYIRLLDDQTFEFISTYQLDTFEYACSILSCSFSDD SNVYYCAGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGSVYSLNAFNGKLLAGI NQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG AIEERARDYNANWMSAVEILDDDIYLGAENNFNLLTVRKNSEGATDEERGRLEVAGEYHL GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQSNLRKV IKGVGGLSHEQWRSFNNEKKVVDARNFLDGDLIESFLDLNRSKMDEVSKAMNVTVEELCK RVEELTRLH NT seq 3270 nt NT seq  +upstreamnt  +downstreamnt atgagtatctggaactatgtggttacggctcacaagcccaccaacgtgaaccattcctgc gtcggcaatttcaccagccctcaagagctcaacctaatcatagcgaaatgcacccgaatc gaaattcatttacttactcctcagggcttgcagcctatgctggacgtgccaatatatggg agaattgcaacacttgaactttttcgcccgcatggtgaggcacaagattttctatttatt gcaacagaaagatacaaattctgcgtgcttcaatgggatgctgagacatctgagcttatc acaagagcaatgggggatgtttcggatcgtattggtcgtcctacagacaacggtcagatt ggcataattgatccagattgcagactaattggactccatttatatgatggattgttcaag gtcattccttttgataataaagggcagcttaaagaagcatttaacattaggctcgaggaa cttcaagttttggatatcaagtttttgtatggttgttcaaaacctacaattgtggttctt taccaggataacaaagatgctcgccatgttaaaacgtatgaggttgctcttaaggataaa gattttgttgagggtccctggtcccagaacaatcttgacaatggagctaatttgctaata ccagtacctccacctctttgtggcgtcattattattggagaagaaacaattgtctactgc agtgccaatgcatttaaagcaattccaatcagaccgtccatcacaagagcctatggaaga gttgatgctgatggttctaggtatttacttggtgatcatactggactacttcacctactt gttataacccatgagaaagaaaaggttactggactcaaaattgagctcttgggcgaaact tccattgcatctaccatttcatatctcgataatgcatttgtatatattggctcaagctat ggagattcacagcttgtaaagttaaatcttcaccctgatgcaaaaggctcatatgtggaa gtactggaacgatatgtcaatttggggccaattgttgacttttgtgttgtggaccttgag aggcaaggccaaggtcaggttgtaacttgttctggagcttataaagatggttctcttcgc atagttcgaaatggaataggaattaatgaacaggcttcagtggaacttcaaggtatcaag ggaatgtggtcactaagatcttccacagatgatccatttgacacattcctggttgtaagt tttatcagtgagacacgaattttggcgatgaatattgaggatgagttggaagaaactgag atagagggcttctgctctcaagtgcagaccctattttgccatgatgctgttttcaaccaa cttgtacaagtaacttcaagctctgtgagactggtcagttctacatctagagagctacgg aatgaatggaatgctcgacctggctattcaattaatgttgccactgctaatgccacccag gttttattggcaactggtggtggccatttggtttatttagaaattggagatggggtcttg acggaagtaaaacatgcacaattggagtatgagatctcatgccttgacataaaccccatt ggggagaatcccaactatagtcagctagctgctgttggtatgtggacagatattagtgtg cggatattttcgcttcctgacctgaatcttatcactaaggagcctttggggggagaaatt atacctcgctctgttcttctttgtgtctttgaagggatatcttacttgttatgtgccctt ggagatggacatttattaaattttctattgaacacaagtactggtgaactagcagatagg aaaaaggtctctcttgggacccagcctattactcttcgcactttctcttccaagaatact acacatgtatttgccgcgtcagataggccaactgttatctacagtagcaacaagaagcta ctttacagcaatgttaatttgaaagaagttagccatatgtgcccttttaactctgcagct tttccagacagccttgcaatcgcaaaagaaggtgaacttactattggcaccattgatgat atccagaaacttcatatccgctctataccgcttggggagcatgcacgccgtatctgtcat caggagcagtccaggacctttgctatttgcagtctgaagtcaaaccagtccagtacagaa gattctgaaacacactatatccgtctgctggatgaccagacctttgagttcatatccact taccaacttgacacctttgaatatgcttgctccatccttagttgttctttctctgatgat agtaatgtgtactactgtgctggcactgcatatgtattgccagaagagaatgagccaacc aagggccgaatattagttttcattgttgaagacgggaagctacagcttattgctgagaag gaaaccaaaggatctgtttactctctgaatgctttcaacggcaagctgctggctggtatc aatcaaaaaatccaattgtacaagtggatgctccgggatgatggtactcgagagttacaa tctgaatgtggacatcacggacacatacttgccctctatgtgcaaactcgtggagatttc attgttgttggtgacctgatgaaatcaatctccttgttaatctacaagcatgaagaaggt gccattgaggagcgagcccgtgactataatgcaaattggatgtcagctgttgagattctt gacgatgacatttaccttggtgctgaaaataacttcaatcttttgactgttcggaagaac agtgaaggtgccactgatgaggagcgtggccgtcttgaggtagctggcgagtatcacctt ggagaatttgtcaatcgattccgacatggttcccttgttatgcgcttgccagattctgat gtgggccagattccaactgtcatttttggtactgttaatggtgtaattggagtcattgct tcacttcctcatgagcagtatctctttttagagaagcttcagtcgaacctgaggaaggtg ataaagggtgttggagggttgagccacgagcagtggaggtcatttaacaatgagaagaaa gtagttgatgccagaaatttcttggatggagatctcatcgagtcattccttgatctcaac cgtagtaagatggacgaggtttcaaaagcaatgaatgttacagttgaggagctttgcaag agagttgaagaattgacgagattgcattga

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