Quercus suber (cork oak): 112007109
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Entry
112007109 CDS
T05868
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 17 isoform X1
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
qsu01009
]
112007109
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
qsu03009
]
112007109
Enzymes [BR:
qsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112007109
Protein phosphatases and associated proteins [BR:
qsu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112007109
Ribosome biogenesis [BR:
qsu03009
]
Eukaryotic type
Pre-60S particles
Helicases
112007109
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
AAA_19
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
112007109
NCBI-ProteinID:
XP_023895181
LinkDB
All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MATTKKRSENPTKAKDAETKKNTNNNEIFASCSFSSLGLHSSLCDQLRDRMGFEAPTLVQ
AQAIPVILSGRHVLVNAATGTGKTIAYLAPIIHHLQGKQPRIQRSDGTFALVLVPTRELC
MQVYEILQKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILVATPGRLLDHLKNTSSFL
HTNLHWIIFDEADMILELGFGKEIEEILDQLGSRPNEFAGKESAVSCNSEPQRQNLLLSA
TLNEKVNHLAKLSLENPVMIGLDDKKIQPVLSSEDFGSLGFDVNDELEQPDKLMNSSIAD
FRVPSQLVQRYVKVPCGSRLVVLLSILKHLFESRPSQKIVVFFSTCDAVDFHYSLLSEFK
FSPNTQPEEELRPLFIRSKTFRLHGNMKQEDRRTTFQAFKTEKLALLLCTDVIARGVDIP
KVRFIIQYDSPGEATEYVHRVGRTARLGERGEALLFLQPVEMDYLKDLEKHGESLTEYPL
LKVLDSFPLYDQKRHVKKFLTLELHPWVLSLQKALESFVVAQPSMKKLAKDAFCSWIRAY
TAHRGELKRIFMVKKLHLGHVAKSFALKEQPSLVGKSFQNQQRKRKREEKQKGLSRPKKR
KFVGKNMKK
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaacgaagaagagaagcgaaaaccccacaaaagcaaaagacgcagagactaag
aagaacaccaacaacaacgagattttcgcatcatgctctttctccagcctcggccttcac
tcctccttatgcgaccagctccgagacaggatgggcttcgaagctcccacgttggtacaa
gcccaagccattccagttattctctctggtcgtcatgtacttgtgaatgctgctactggt
actggaaaaactattgcgtacttggctccaattattcatcacttgcagggaaaacaacct
cgtattcagcgttctgatggaactttcgcgttggtccttgtaccaacgcgagaactatgc
atgcaggtttatgaaatcttacagaagttattgcaccgttttcattggattgtcccgggt
tatataatgggtggtgaaaacaggtcaaaggagaaagccaggcttcgcaaaggcatatct
attcttgttgctactcctgggcgcctcttggatcacttaaagaatacatcatcatttttg
cacactaatttgcattggataatctttgacgaagctgatatgattttggaattaggattt
gggaaagaaatagaggaaatactagatcaattgggttcaaggccaaatgagtttgctggc
aaagagagtgctgtttcatgtaattctgagcctcagagacagaatttgctattatcggct
actttaaatgaaaaagtaaatcatcttgccaaacttagtttagagaatcctgttatgatt
ggccttgatgacaagaagatacagcccgtattatcatctgaagattttggatctttagga
tttgatgtgaatgatgaattagaacagcctgataaattgatgaactcttcaattgcagat
tttagagttccatctcaattagttcagagatatgtgaaagtaccatgtggctcacggcta
gttgtacttctttctattctaaagcatctttttgagagcagaccttcccaaaagattgtg
gtattcttttcaacatgtgatgcagtggattttcactactctctgctaagtgaattcaaa
ttctcccctaatacacaaccagaggaagaactaagaccattgttcattagaagtaaaact
tttcgattacatgggaatatgaagcaggaggatagaagaaccacatttcaggcttttaaa
acagaaaaattagctcttctcttatgcacagatgttattgctagaggcgtggatattcca
aaagttagatttattatacaatatgattctccaggggaggctacggaatatgtgcatagg
gttggcagaactgctcggttgggcgaacgaggagaggcattgttatttctgcaaccagtt
gaaatggactatttaaaagacttggagaaacatggcgagtctttaactgagtatcccctc
cttaaagtcttggatagtttcccattgtatgatcagaagcgccatgtcaagaagtttctc
accttagagttacatccctgggttctatctctgcagaaggcacttgaatcatttgttgtg
gcccagccaagcatgaagaaactggccaaggacgctttttgctcctggatccgtgcatac
actgcccatcgtggtgagctgaaaagaatatttatggtgaagaaacttcatttagggcat
gtcgcaaagagctttgcattgaaggaacaaccttccttggttggtaagtcatttcaaaac
caacaaaggaagaggaagagagaagaaaagcagaagggactatcgagaccgaaaaagagg
aaatttgtcggtaaaaacatgaagaaataa
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