KEGG   Quercus suber (cork oak): 112007314
Entry
112007314         CDS       T05868                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
qsu  Quercus suber (cork oak)
Pathway
qsu03020  RNA polymerase
qsu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:qsu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    112007314
  09124 Replication and repair
   03420 Nucleotide excision repair
    112007314
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:qsu03021]
    112007314
   03400 DNA repair and recombination proteins [BR:qsu03400]
    112007314
Transcription machinery [BR:qsu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     112007314
DNA repair and recombination proteins [BR:qsu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      112007314
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 112007314
NCBI-ProteinID: XP_023895419
LinkDB
Position
Unknown
AA seq 138 aa
MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSEDPLNQVSQVFEKSLQ
YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHD
DEAIEKMLNDLSLIKKFE
NT seq 417 nt   +upstreamnt  +downstreamnt
atgtctggggaagaagaagagaatgccgctgagctcaaaatcggagacgagtttttgaag
gccaagtgtttaatgaattgtgaagttgctttgattcttgaacataagtatgagcagctt
cagcagatgtctgaggatccactgaatcaagtttctcaagtgtttgaaaagtcactgcag
tatgtgaagcgatttagccgctataagaatcctgatgctgttagacaagtgcgagaaatc
ctgagtagataccagttggctgagtttgagctttgtgttcttggcaacctttgccctgaa
acagtggaggaagcaattgctatggtaccatctatcaagaccaaaggacgggctcatgat
gatgaggcaatcgagaaaatgttgaatgacctgtcactcatcaagaaatttgaatag

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