Quercus suber (cork oak): 112007387
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Entry
112007387 CDS
T05868
Name
(RefSeq) LOW QUALITY PROTEIN: BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112007387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsu03019
]
112007387
04121 Ubiquitin system [BR:
qsu04121
]
112007387
03036 Chromosome and associated proteins [BR:
qsu03036
]
112007387
03400 DNA repair and recombination proteins [BR:
qsu03400
]
112007387
Messenger RNA biogenesis [BR:
qsu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
112007387
Ubiquitin system [BR:
qsu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
112007387
Chromosome and associated proteins [BR:
qsu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
112007387
DNA repair and recombination proteins [BR:
qsu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
112007387
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
BRCT_2
zf-C3HC4_4
zf-HC5HC2H_2
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4
zf-RING_6
PHD_NSD
zf-RING_2
Prok-RING_4
zf-RING_10
PTCB-BRCT
RTT107_BRCT_5
zf-Nse
zf-C3HC4_5
Motif
Other DBs
NCBI-GeneID:
112007387
NCBI-ProteinID:
XP_065616836
LinkDB
All DBs
Position
Unknown
AA seq
721 aa
AA seq
DB search
MEDSMNTKSDSSSSSSKTLLINPWLFHYHKLALELKCPLCLNLLHKPMLLPCNHIFCNSC
IPISAQLESDCPVCKSQYINKDLRTAPFIENLVAIFRGLEATYCSNLFQQPVSSGTGQAS
LYTGKFSKESVEGVKSSSGQSVFSLTANKRVQVPLDLNCSVEDGVGKNDKFENHNSPVVG
KGGREEDKFNGAVNMNPPSDSLPMRPGNHEECRVVEIEMNQXAQSLPDSSLSFSDAKGSD
DDSCDRGSEHSPENSLSKGTINKNSEDRKRQLRHENSGNETEDGHSRDIKRQKKLNYGSS
EFIPSVVSHSEISVAPNSELELESRVPPVALQQAVSNKSICAFCQSSKVSETSGPMLHYA
NGKKVVGDEAIRSNVIHVHTICIDWAPQVYYDDNENVKNLKAEVARGAKLKCSRCGKKGA
ALGCYMKSCRKSYHVPCAAEIANCRWDNENFLMLCPAHSSVRFPNEKPKSGKQVLKDHPE
PIQKATPQSNGWEAPSDGAKEWVLCGSALSTEERILVVKFAIMCGATVTKFWKPNVTHVI
AATDAQGACTRTLKVLMGILNGRWILKIDWIKACMEAMHPVNEEPYEVSLDNHGCCDGPK
TGRLLALNNVPKLFNGLKFYFTGGFVPEYEEDLCDLVMTAGGTVLKSKEELVPQSCDGQA
KILVVYNLDPPQGSKVGEEVDILWKRLTEAQDVAANIGSQVIGHTWLLESIAACELQPLF
S
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggaggattctatgaatacgaagagtgatagtagtagtagtagtagtaaaacacttctc
atcaacccatggcttttccattaccacaaactcgctctcgagctcaaatgccctctctgc
ttaaacttgcttcacaaaccaatgttactcccgtgcaatcacattttctgcaattcctgt
atacccatttcagcacagcttgaatcagattgccctgtctgtaaatctcagtatatcaac
aaagatttaaggactgcacctttcatagaaaatttggttgcaatcttcaggggattggaa
gctacttactgttccaatctttttcagcagcctgtttcatctggtacaggccaggcttca
ctttatactggtaaatttagtaaggagagtgttgaaggggttaaatcaagcagtgggcag
tctgtcttttcattaacggctaataagcgagttcaggttccgttggatttgaattgttct
gttgaagatggggttggcaagaatgataaatttgagaaccacaattcaccagtagttggt
aaaggtggcagggaagaagacaaatttaatggtgctgtgaatatgaatccaccatcagac
agtctaccaatgagacctgggaaccacgaagagtgcagagtcgtggaaatagaaatgaat
cagngggcacagtcactaccagatagctctctatcatttagtgatgccaagggttcggat
gacgacagctgtgatcggggcagtgagcatagtccagaaaattctttgagcaagggaacc
atcaacaaaaattctgaagataggaagaggcagttgagacatgagaattctggcaatgaa
actgaagatggtcattcgagggacatcaagaggcaaaagaaattaaactatggctcatca
gagttcattccttcggttgtttcacattctgaaatctcagtggctcccaattctgaattg
gagcttgagtctagggtgcctcctgttgctctgcagcaggctgtgtctaataaaagcatt
tgtgcattttgccagtcttctaaagtctcggagactagtggcccaatgttgcattatgct
aatgggaaaaaggtagtgggagatgaggcaattcgttcaaatgtcatacatgttcacaca
atatgcattgattgggcaccacaagtgtattatgatgataacgaaaatgttaagaatttg
aaggcagaagtggcaaggggtgctaagctcaagtgcagcaggtgtggaaagaagggagca
gccctgggttgctatatgaaatcctgtcgaaaaagctatcatgttccttgtgcagcagaa
atagcaaattgtcgctgggataatgaaaactttctcatgctctgtccagctcattcttct
gtcaggtttccaaatgagaagcccaagtctggaaaacaagtcttaaaggatcatcctgag
ccaattcagaaagcaactccgcagtccaacggttgggaagctccatcagatggagctaaa
gaatgggttttatgtggttctgctctatccacagaagagaggattcttgtggtcaagttt
gcgatcatgtgtggtgcaactgtgaccaagttctggaaaccaaatgtaacgcacgtgatt
gcagccacagatgcacagggtgcgtgcaccaggacgctgaaagttctaatgggcattttg
aatgggagatggattcttaaaattgactggataaaagcatgcatggaagctatgcatcct
gtgaatgaagaaccttatgaagttagtcttgacaaccatggttgttgtgatggccccaaa
actggcaggcttttggcattaaacaatgtgccaaagctctttaatgggttgaagttctat
ttcactggtggctttgtgcctgaatacgaagaagacctctgtgatttggtcatgacagca
ggaggtactgttttgaaaagtaaagaagaattggtgccacaaagctgtgatggccaggca
aagatactagttgtttacaaccttgatcccccacaaggatccaaggtaggagaagaagtt
gatattctttggaaaagattaactgaggcacaggatgtagctgccaatattggatcccaa
gtcattggtcacacatggcttttggaatcaattgctgcatgcgagttgcagcctcttttc
agctga
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integrated database retrieval system
