Quercus suber (cork oak): 112007466
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Entry
112007466 CDS
T05868
Name
(RefSeq) transcription initiation factor IIF subunit alpha isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112007466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsu03021
]
112007466
Transcription machinery [BR:
qsu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
112007466
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
Motif
Other DBs
NCBI-GeneID:
112007466
NCBI-ProteinID:
XP_023895577
LinkDB
All DBs
Position
Unknown
AA seq
541 aa
AA seq
DB search
MSFDLLLKPSCSGCGSTTDLYGSNCKHMTLCLTCGKSMAENRGKCFECGATVTRLIREYN
VRASSSNDKNYFIGRFVTGLPNFSKKKNAENKWSLHKEGLQGRQVTDALREKYKNKPWLL
EDETGQFQFQGHLEGAQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
KNRKKTADGYERWMMKAANNGAAAFGEVERFDDKESGVAGGRGRKKTTGDEEEGNVSDKG
EEDEEEEAARKNRLGLNKREGDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTDDDEAVG
NDPEEREELAPEVPAPPEIKQDEEDEDEDNEEEGGLSKSGKELKKLLGRTGGLNDSDAED
DDDDEDIDDDIGLSPVLAPKQKDAPKEEPAENSPLKTVPSGAAKGTPSSSKSAKSKRKLN
GDDAKATSGAPPKKVKTENELKSSVKEENVPTSKSTVPSKGTTSSLSKSASTSSAGPVTE
DEIRAVLMQKTPVTTQDLVANFKARLRSPEDKNAFAAILRKISKIQKSNGSKSNYVVLRE
K
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcgatctgctgttgaagccgtcgtgtagtggttgcggatcgaccacggacttg
tacggaagcaactgcaagcacatgactctgtgcttgacctgtggcaaaagcatggccgag
aaccgtggcaagtgcttcgagtgcggcgccaccgtcactcgcttgattcgagaatataat
gttcgtgcaagttctagcaacgacaagaattactttattggtagatttgtgactgggttg
ccaaatttttcgaagaagaaaaatgctgagaataaatggtctctccataaagaagggctt
caaggacgccaagttactgatgccttgcgggagaagtacaagaataaaccctggctattg
gaggacgaaacagggcaattccagtttcaaggtcatcttgaaggtgcacaatctgctacg
tattacctattaatgatgcaaggaaaggagttcgttgctatccctgctggatcttggtac
aactttaacaaggttgcacagtataagcaacttacgctggaggaagcagaagaaaagatg
aagaataggaaaaagactgcagatggatatgaaagatggatgatgaaagctgcaaataat
ggagctgctgcatttggtgaagtggagaggtttgatgacaaggagagtggtgtggctggt
ggaaggggacgtaaaaaaacaactggtgatgaagaagaaggtaatgtttcagataaaggg
gaagaggatgaagaagaagaggcagcaaggaagaatcgattgggactcaacaaaagagaa
ggtgacgatgatgaggaaggtcccaggggtggcgatcttgatttggatgatgatgatatt
gaaaagggtgatgattgggagcatgaagaaattttcactgatgatgatgaagcagttggt
aatgatcctgaggaaagggaagaattggcccctgaagttcctgctcctccagaaattaag
caggatgaagaggacgaggatgaagataatgaagaagagggtggactgagtaaatctgga
aaagagttgaagaagctacttgggcgaactggtgggctgaatgattcagatgctgaggat
gatgatgatgatgaggatatcgatgatgatattggcctttcccctgtgctggctccaaag
cagaaggatgcacctaaagaggaacctgctgaaaacagtcctttaaaaacggtgccttct
ggagctgctaagggaaccccatctagttccaagtctgcaaagtctaagagaaaattgaat
ggggatgatgcaaaagcaactagtggtgcacctccaaagaaggtgaagacagaaaatgaa
ctaaaatcttctgtgaaagaagaaaatgttcccacttctaaaagtactgtgccttcaaaa
ggaacaacatcatcattgtcaaaatctgcttcaacatcgtctgctgggcctgtcactgaa
gacgaaatcagggctgttttaatgcaaaagacaccagtgacaactcaggatcttgttgct
aattttaaggcaagactaagatcaccagaggacaagaacgcatttgccgccatcctgagg
aaaatttctaagatacagaagtcaaatggttccaagtctaactatgttgttttgagagag
aaatga
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