Quercus suber (cork oak): 112008692
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Entry
112008692 CDS
T05868
Name
(RefSeq) serine/arginine-rich splicing factor RS40 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112008692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qsu03041
]
112008692
Spliceosome [BR:
qsu03041
]
Common components
Common spliceosomal components
SR proteins
112008692
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
Nup35_RRM_2
RNA_bind
RRM_Nup35
DUF2129
Motif
Other DBs
NCBI-GeneID:
112008692
NCBI-ProteinID:
XP_023896793
LinkDB
All DBs
Position
Unknown
AA seq
389 aa
AA seq
DB search
MRPIFCGNFEYDARQSDLERLFGRYGKVERVDMKSGFAFIYMENERDAEDAIRRLDRTEF
GRKGRRLRVEWTKHERGIRRPGGSRKSSANTRPSKTLFVINFDTHHTRTRDLERHFEPYG
KIVSVRIRRNFAFVQYESQEDACRALDGTNMSKLLDRVISVEYAVRDDDDERRNGYSPDR
RSRDRSLERGRDRRRSPSPYRRERGSPDYGRGASPYRKERGSPDYGRGGSPSPYRRERAS
PDYGRTRSRSPYQRDRVGSDRRRGPSRSPYQPERVSADVARGPSRSPYGREKASPDNGRG
PSHSPYERERESPNNGRDLSRSPYGRERASPEDGHVPSQSPYDGRERTSPDNGHEVSPIP
EPRDSPNFGGGPESPMHERYRSRSPPGEE
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaggcccatcttctgtgggaattttgagtatgatgcacggcagtctgatctggaacgg
ctttttggtagatatgggaaggttgagagggtggatatgaagtctggattcgcttttatc
tatatggaaaacgagagagatgctgaggatgctattcggagacttgatcgaacagaattt
ggtcgtaagggacgtaggcttcgtgttgaatggacaaaacatgagcgtggcattagaagg
cctggaggttccagaaaatcttcagctaatacgaggccttcaaagaccttgtttgttatt
aatttcgacacacatcatactaggactagggacttggagaggcactttgaaccatatggg
aagatagtgagtgtaaggattagaaggaactttgcatttgttcagtatgaatcacaggag
gatgcttgtagagcattggatggaacaaacatgagcaagttgttggatcgagttatttca
gtggagtacgcagttcgggatgacgatgatgaaagaagaaacggatatagtcctgataga
agaagtcgagataggtcattggagagaggccgtgatagaaggcgatccccaagcccctat
cgaagagagaggggcagccctgattatggccgtggtgctagtccatataggaaagagaga
ggaagccctgattatggccgtgggggcagcccaagtccctataggagagagagggctagc
cctgattatggtcggacacgcagtcgtagtccttatcaaagagatagggttgggtctgat
cgtcgccgtggtcctagccgtagtccttaccaaccagaaagggtgagtgctgatgttgct
cgtggccccagccgtagtccttatggaagagagaaggcaagccctgacaatggtcgtggc
cccagtcatagtccttatgaacgggagagggaaagccctaacaatggtcgtgaccttagc
cgcagtccttatggtagagagagggctagtcctgaggatggtcatgtccccagccaaagc
ccttatgatgggagagagagaactagccctgacaatggtcatgaagtcagccccatacct
gaacccagggacagtcctaattttggtggtggtccagaaagccctatgcatgagagatat
cgcagtcgatcaccccctggagaggaatga
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