Quercus suber (cork oak): 112008798
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Entry
112008798 CDS
T05868
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
112008798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsu03021
]
112008798
Enzymes [BR:
qsu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
112008798
Transcription machinery [BR:
qsu03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
112008798
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
112008798
NCBI-ProteinID:
XP_065637158
LinkDB
All DBs
Position
Unknown
AA seq
944 aa
AA seq
DB search
MYYMQSKHCHLRGADPQKLVSCKEEPSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNS
FSDRREGYTDKAVVIRCERKNQSSVSVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALV
DTTDHEIYVSLTCCYSERDEMEKGAVGTQLMGERAKIILDEVRDLSLFTRLQCLEHIGEH
FQPVMEGLETKSYSDVADSVLEDYIFVHLDNNYDKFNLLIFMLQKLFSLIDQTSVPDNSD
SLQNQEVLLPGHLITIYLKEKLEDWLRKAKKSLQDEINKKSNINNKGSNNKSKSFDFCSL
ADVKKILDKNPVKQISSSVENLLKTGRLITQTGLDLQQRAGFTVQAERLNFLRFISHFRA
VHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSNCRITSFFDSQGNIR
DFKKIRKTILSVLIAVGMTPSLPKLVQAGPPEVLSVLLDGRVVGSLPSSMVEKVVGHLRR
LKVSANSMIANDLEVGYVPLSLGGAYPGLYLFTSPARFVRPVRNISIPSEESQNIELIGP
FEQVFMEIRCPDGGDGGRRNAFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMA
KQTMAFSSQAINFRADQKLYHLQTPQSPIVRTSSYTKYGIDEYPSGTNAIVAVLAYTGYD
MEDAMILNKSSVERGMCRGQIYQTETIDLTEQSSRSDHSQKIFRRSNVNKSMHSTIDSDG
LPYVGQTIQQNQPYYCTYDEVTSTTRPYNRKGSEPVVVDYVALDGKNKEHPRKANIRFRH
PRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLES
VAAKGGSLHGYFVDATPFTIPVKKDNGDSKPKTSSLEETDGKTESKPNSLVEELGEMLKK
KGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQV
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgtattatatgcagtcaaagcattgtcatttgagaggtgctgatccccagaaactggtc
tcttgcaaagaagaaccatcagaaatgggtggatacttcatcttgaatggtcttgaaaga
gtggttcgactcttaatattgccaaagcggaattatccgatgagtatggtgcggaattca
tttagtgatcgcagagaaggatatactgataaagcagttgtcataaggtgtgaaagaaaa
aatcagtcttcagtatcagtcaaattgtattaccttcgtaacggaagtgcaagacttgga
ttttggatacaagggagggagtacttgcttcctgtaggcgttgttctaaaggctcttgtt
gacacgactgatcatgaaatttatgtgagtttgacgtgctgctatagtgagcgagatgag
atggaaaagggtgctgttggcactcagcttatgggtgaaagggcaaaaattattctggat
gaagttcgtgatctgtctcttttcactcgtcttcaatgtctagagcatattggagagcat
ttccaacctgttatggagggactggaaaccaaaagttattctgatgttgctgattctgtt
cttgaagactacatatttgttcaccttgataacaattatgacaagttcaatctgctcatc
tttatgctgcagaaacttttctcacttatagatcagacatctgttccagacaactcagac
tccttgcagaatcaggaagtcttactccccggtcatctgattaccatttatctcaaggaa
aagctagaagattggctgcgcaaggcaaaaaagtctcttcaagatgagatcaataaaaag
agcaacattaacaacaagggcagcaacaacaagagcaaaagttttgatttttgcagctta
gctgatgtcaagaagattttggataaaaatcctgtgaagcaaatcagttcttctgttgaa
aacttgttaaaaactggaagactgattacacaaacaggtctagatttgcagcagagggca
ggctttacggttcaggcagaaaggcttaatttcttacgttttatttcgcattttcgtgct
gttcatcgaggggcttcatttgctggacttcgcaccacaactgtgcggaagttgctacct
gaatcttggggttttctttgccccgtgcacacacctgatggggagccatgtggcttgctg
aatcatatgactagcaactgtcgaattacatctttctttgattctcaaggaaatattaga
gattttaagaaaataagaaagactattctcagtgttttgattgccgttggaatgacacct
tcactgccaaagctagttcaagctggccctcccgaagttctttctgtccttttagatggt
cgtgttgttggttctttaccttcctctatggttgagaaagtcgtgggtcacttacggaga
ttaaaagtttcagctaattcaatgattgcaaatgatctggaggtaggatatgttccgttg
agtctaggtggagcataccctggtttgtacttgttcacatctcctgccagatttgttcgg
ccagttagaaatatttcaattccttccgaggaaagtcagaatattgaacttattgggcca
tttgagcaggtttttatggaaataagatgtcctgatggtggagatggtgggagaagaaat
gcttttcctgcaactcatgaagaaatccacccaactggaatgctcagtgtggttgctaat
cttacaccttggtcagatcataatcaaagcccacgtaatatgtaccagtgtcagatggca
aaacaaacaatggctttctcttcacaagcaattaactttcgtgcagatcaaaagctatac
catcttcagactcctcaaagtcccattgttcgcacgagttcatatacaaagtatggcatt
gatgaatacccatcaggcacaaatgcaattgttgcagtgctagcatatacaggatatgac
atggaggatgccatgattttaaataagtcatctgtggagcgtgggatgtgtcgtggacaa
atataccagacggaaactattgacttaactgagcagagcagcaggtcagatcattcccag
aaaatatttcgaagaagtaatgttaataagtcaatgcattctacgattgattcagatggg
ctgccatatgttggtcagacaatacaacaaaatcaaccctattactgcacttatgatgag
gtaacaagtaccacaagaccctacaaccggaagggttctgagcctgttgttgttgattat
gttgctcttgatgggaaaaacaaggagcatcctcgaaaggcgaatatacgttttcgacat
cctagaaaccccgtcattggcgataaatttagcagtagacatggtcagaaaggtgtttgc
tcccaattgtggccagatattgatatgccattttctggagttacaggaatgcgtccagat
ttgataattaacccacatgcgtttccatcaaggatgacaattgcaatgcttttggagtct
gttgctgctaagggaggtagcttacatggttattttgtggatgcgacaccatttactatc
ccagtcaagaaagataatggagattctaaaccaaaaactagttctctcgaggaaactgat
ggaaagaccgaatcaaaacctaattcacttgttgaggagcttggtgaaatgctaaaaaaa
aaggggttcaattaccatggtgtggaggtattatatagtggtgtatatggaacagagctc
acatgcgagatctttattgggcctgtttattatcagagactccggcacatggtttcagac
aaatatcaggtatga
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