Quercus suber (cork oak): 112008808
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Entry
112008808 CDS
T05868
Name
(RefSeq) retinoblastoma-related protein isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
qsu03000
]
112008808
Transcription factors [BR:
qsu03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
112008808
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
Motif
Other DBs
NCBI-GeneID:
112008808
NCBI-ProteinID:
XP_023896915
LinkDB
All DBs
Position
Unknown
AA seq
1067 aa
AA seq
DB search
MSPAALEKMEDAKPSEAASANNSQTDSAAATVDPSEARFSDFCKNGMLLDENTCTQAMKL
FKETKHLLQTNVSAFGNGTLDEAEKFWFAFVLFSIRRLSEKNGDSEQQGSSDNGYTLCQI
LRAAKLKYVSDHSNFLYFVIDRFFVFWGHPHIFVLHSIMDFFKELPQFVVKAGPTLSNVY
GADWENRLEAKEMQANFVHLSLLSQSYKRAIREFFLTTEANVDKQSAVASASGYVSDYHR
FGWLLFLALRVHAFSRFKDLVTCMNGLVSILAILIIHVPVRFRNFKFDDSQLFVKKDGKG
VDILSSLCNKYQTSEDELRKIMEKANNLIADILCKKPQPASECRIGNLENIDTDGLSYFE
DLLEDSSLSSSLGILEKDYDGAIRSKAELDERIFINDEDSLLGSGSLSGGSVNISGVKRK
FDSIASPAKTITSPLSPQRSPASHANGNMGFSNSKMVATPVSTAMTTAKWLRTVISPLPP
KPSAELKRFLASCDRDLTEEVDTRAKIILFATFPSTAQGEHCMSTNLQSANLMDSIWAEQ
RKFEALKLYYRVLEAICRAEAQILHASNLTALLTNERFHRCMLACSAELVLATHKTVTML
FPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL
TVARPNLSAEINRLGLLAEPMPPLDAICMHINMNSKFISGGVPPFPSLQKHETSPGQNGD
IRSPKRSCPDYRSVLVERNSFTSPVKERLLAFSNLKSKPPPPPLQSAFASPTRPNPSGGG
ETCAETEINIFFSKITKLAAVRINGMVERLQQSQQIRENVYCLFQQILSQRTSLFFNHHI
DQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWSSARRNGKTGPDHV
DIITFYNEIFIPAVKPLLVELGPAGATTKTNRVPEVHNNNDAQCPGSPKISPFPSLPDMS
PKKVSATHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNGTR
KLRGTLNFDDVDVGLVSDSMVANSLYLQNGSCASSSGAPLKSEQPDS
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgagtccagctgcattggagaagatggaagatgctaagccttcggaagcagcatcggcc
aacaattcacaaacagatagcgccgcggctactgtcgacccatctgaagctcgattctcc
gacttctgcaagaacggaatgttgttggatgagaacacttgcacgcaagctatgaagctg
ttcaaagaaaccaaacaccttctacagactaatgtttcagcttttggcaacggaacgctt
gatgaagcagaaaagttttggtttgcttttgttctgttttctattagaaggctaagtgag
aagaatggggatagtgagcagcaagggtctagtgataatggatatacgttatgccagata
ttgagagctgcgaagctgaagtatgtttctgatcattcaaatttcctttattttgtgatc
gatcgcttttttgtgttttggggtcatcctcatatttttgttttacatagcattatggac
ttcttcaaggagcttcctcagtttgttgtcaaggctggtccaactttgagtaatgtatat
ggtgcagattgggagaatagacttgaggcaaaagagatgcaggccaattttgtgcacttg
agtctactaagccagtcctacaaacgtgcaatccgggaatttttcttgacaactgaagca
aatgttgataagcagtctgctgttgctagtgcatctggctatgtctcggactaccaccgt
tttggatggttgctttttctggcactccgcgtacatgcgttcagccgttttaaggacttg
gtgacttgcatgaatggtttggtttccatattggctatcttaattattcatgttcctgtt
cgcttcaggaatttcaaatttgatgattctcaactatttgttaagaaagatggcaaaggt
gtagacatcctttcatcactttgcaacaaatatcaaacatcagaagatgagttgaggaaa
ataatggaaaaggctaataatttaatagcagatatcttatgtaaaaagcctcaaccagca
tctgagtgtagaattggaaacttggagaatattgacacagatggtttgtcatattttgaa
gatctactggaggactcatctttgtcatccagtttaggtattttagaaaaggattatgac
ggtgcaattcgtagtaaggccgaactggatgagaggattttcattaatgatgaggacagc
ttacttggttcagggagcttgtcaggaggttctgtgaatataagtggtgtgaagaggaaa
tttgattcgatagcctcacctgctaagacgattacaagtccactctctcctcagcgctct
cctgcatctcatgcaaatggaaatatggggttttctaattcaaagatggtagctacgcct
gtaagcacagcaatgacaactgcaaagtggcttcgtactgtcatttcaccacttccacca
aagccctcagcagagctgaagcgtttcctggcatcttgtgatagggatttaactgaggaa
gtagatacaagggcaaaaataatattgtttgctacatttccaagtactgctcagggagag
cattgtatgtctacaaacctgcaatctgcaaatctcatggacagcatctgggcagaacaa
cgaaaatttgaagcactcaagttatattatagggtattggaagcaatttgtagagcagag
gcccaaatattgcatgcaagtaatttgacagctctattgactaatgagaggttccataga
tgtatgctcgcctgttctgctgaactagttctggcaacacataagactgttacaatgttg
tttcctgcggtgttggagaggactggcattacagcttttgatcttagcaaggtcatcgaa
agtttcattagacatgaggaatccctcccgagagaattgaggcggcatctgaattcatta
gaagaacgacttttggagagtatggtatgggaaaaggggtcctctatgtataattctttg
acagttgcaaggcctaacctctccgcagaaataaaccgtcttggactattggcagaacca
atgccacctttggatgcaatttgcatgcacattaacatgaattctaaatttatttctgga
ggggttcctcccttcccttctttgcagaagcatgagacttcaccaggtcagaatggggat
atcagatccccaaagagatcatgcccggactatcgaagtgtattagtggagcggaattcc
tttacatcaccagtcaaggaacgcctcctggccttcagtaaccttaaatcaaagccgcca
ccacctcctttgcagtctgcgtttgctagtccaacacggccaaatccaagtggtggaggg
gagacgtgtgcagaaactgaaatcaatatattctttagcaagattactaagttggctgct
gtcagaatcaatggtatggtcgaaaggctacaacagtctcagcagattagggagaatgtg
tattgtctttttcaacaaatactaagtcagcggacatctctattttttaaccatcacatt
gaccaaatcatcctttgttgtttctatggagttgcaaagatatctcaactcaatctgact
tttagggaaattatttacaactataggaagcaaccacaatgtaaacctcaagtttttcgc
agcgtgtttgttgattggtcatctgcacggcgcaatgggaaaacaggaccagatcacgtt
gatatcattacattttacaatgaaatttttatccccgctgtaaagcctctgctggttgag
cttggccctgctggagcaactacaaaaactaaccgagttcctgaagtccacaataataat
gatgctcaatgtcctggatcgcctaaaatatctccttttccaagtctccctgatatgtct
ccgaagaaagtatcagctacacacaatgtgtatgtctctccattgcgatcatccaagatg
gatgctctgatatcacatagctcgaaaagctattatgcttgcgttggagagagtacacat
gcatatcagagcccttcaaaagacctgactgccatcaataaccgcttgaatggtacccgg
aagcttagaggcaccctaaacttcgacgatgttgacgttggcttggttagtgattctatg
gttgccaacagcctctaccttcagaatgggagttgtgcatcctcatcaggtgcaccactg
aaatctgagcaacctgactcctga
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integrated database retrieval system
