Quercus suber (cork oak): 112008890
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Entry
112008890 CDS
T05868
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC112008890
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qsu04131
]
112008890
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
qsu04812
]
112008890
Enzymes [BR:
qsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
112008890
Membrane trafficking [BR:
qsu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
112008890
Cytoskeleton proteins [BR:
qsu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
112008890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
Vps4_C
AAA_22
AAA_16
AAA_14
TIP49
NPHP3_N
Mg_chelatase
MIT
FliT
DUF815
AAA_2
RNA_helicase
AAA_25
nSTAND3
IstB_IS21
Guanylate_kin
AAA_24
nSTAND6
Motif
Other DBs
NCBI-GeneID:
112008890
NCBI-ProteinID:
XP_065632955
LinkDB
All DBs
Position
Unknown
AA seq
488 aa
AA seq
DB search
MSFLKGLIDAFDSIFSSPAYDSNPTQTNPIHPNSSSSSSSSSSSSSSSTMEGVSNERVAH
KLKGYHDLATEEIAKAVRAEEWGLVDDAILHYKNAQRILLEASSTPAPSYITSSEQEKVK
SYRQKISKWQGHVSERLQALSRRAGGTSTSKSPALNPRKDVLQKSSSFSTNSPSMRNQTD
KVVSSKPTKDANSGYEDKLVEMINTTIVDRSPSVKWEDVAGLEKAKQALMEMVILPTKRR
DLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRA
LFMVAKSRQPSVIFMDEIDSVMSTRLANENDASRRLKSEFLIQFDGVASNSNDVIIVIGA
TNKPQELDDAVLRRLVKRIYIPLPDENVRRLLLKNKLKGQAFSLPNGDIERLARVTEGYS
GSDLQALCEEAAMMPIRELGANILTVKANQVRPLRYEDFHKAMTVIRPSLNKSKWEELEQ
WNEEYGSN
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcctgaagggactcatcgacgcttttgattcaatctttagctccccagcctac
gattccaacccaacccaaaccaaccctatccatcccaattcttcttcttcttcttcttct
tcttcttcttcttcttcttcatcaaccatggaaggcgtgtcgaacgagcgcgtcgcacac
aagctcaagggttaccacgacttggcaacggaagagatcgccaaggccgttagagccgaa
gagtggggcttagtcgacgatgctattcttcactacaagaacgcccagagaatactcctc
gaagctagttccactcctgctccttcatatattacctcaagtgaacaagagaaggtgaaa
tcttatcgtcaaaaaatatcaaaatggcagggtcatgtgtcagaaagattacaagcttta
agtaggcgtgcaggtggcacatcgacaagcaagagccctgcactgaatcctagaaaggat
gttttgcaaaaatcttcctcttttagtacaaacagcccaagtatgaggaatcagacagat
aaagttgtaagctctaaacctacaaaagacgctaactctggttatgaagacaaattggtt
gaaatgataaatactacaatagtggatagaagtccgtccgttaaatgggaagatgttgct
ggtcttgagaaggcaaagcaagctttaatggagatggtaatcttgccaactaaaagaaga
gacttatttactggtcttcggaggccagctagaggtttgcttctctttggtccacccggt
aatgggaagaccatgcttgccaaagcagtcgcttcagagtcagaggcaacattttttaat
gtctctgcatcttccttgacatcaaaatgggtgggggaggctgaaaagcttgtacgggct
ctgttcatggttgctaaatccagacagccatctgtaattttcatggatgaaattgatagt
gtcatgtcaacaagattggctaatgaaaatgatgcgagtcgaaggttaaagtcagagttt
cttatacaatttgatggggtggcctctaatagtaatgatgtaataattgtcattggtgct
actaataagccacaagaactggatgatgcagttcttaggagattggtgaagcgaatatac
atacctttaccagatgaaaatgttaggagactacttcttaagaacaaactcaagggccag
gccttttccttacccaatggagatatagagagacttgccagagtgacagagggatattct
ggaagtgacctacaagcgttatgcgaagaggctgcaatgatgccaatcagagagctaggt
gctaacattcttactgtcaaagcaaatcaggtaaggccactaagatatgaagatttccat
aaggcaatgacagtcatcagacccagcttaaacaaaagcaagtgggaagagcttgagcaa
tggaatgaagagtatggctctaactga
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