Quercus suber (cork oak): 112008948
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Entry
112008948 CDS
T05868
Name
(RefSeq) ATP-dependent DNA helicase Q-like 4A
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03440
Homologous recombination
qsu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112008948
03460 Fanconi anemia pathway
112008948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
qsu03032
]
112008948
03400 DNA repair and recombination proteins [BR:
qsu03400
]
112008948
Enzymes [BR:
qsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
112008948
DNA replication proteins [BR:
qsu03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
112008948
DNA repair and recombination proteins [BR:
qsu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
112008948
Bloom's syndrome complex (BTR)
112008948
FA (Fanconi anemia) pathway
112008948
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
RecQ_Zn_bind
HRDC
ResIII
JIP_LZII
E2F_CC-MB
HHH
BAR_4
Motif
Other DBs
NCBI-GeneID:
112008948
NCBI-ProteinID:
XP_023897078
LinkDB
All DBs
Position
Unknown
AA seq
1216 aa
AA seq
DB search
MTMEMHMSQSNSGQRLKCDDNLPKVNLSQHANAHDNFLSQNKFLSSNFLFSLSSQKPGAE
GAMWARAMDFQSQNIARLQSQRAQVEKAWHTLSNLQISCRKYTKPGKTVQVKDLHNNVSH
SVGGRTISQSTFSIERSLEGMQTHKNFSETNSKISQPGRSMGNNFSSSNVRAMEAEKSQI
RASIVNNSHSQNLDRSFNNHTVHIDQVKESAGIFAGNLDDDDILENIDVDNIVERYQSTC
TPQPSISKLPPITPTIDKDNFSRQDESSLPLELCSNCSHGLKLGLCPEATTHLQEMKDML
IVISNELLDNVNELTSEHIEKLRQDRSQLNKQIQQLDGYLRANSVDEERQRSHYSTSTTA
IRSFQYETPQAAAFKTPMRFEAQVNLNNELGGNERWNSFSSVDRFDVSSGPLEREPYVPK
YVEVNYIEGSNDKKWSSQNFPWAKKLEANNKKVFGNHSFRPNQREVINATMSGCDVFVLM
PTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPAAYLSGNMEWTEQQEI
LRELCSDYCKYKLLYVTPEKVARSDVLLRHLESLHARELLARVVIDEAHCVSQWGHDFRP
DYQGLGILKQKFQNTPVLALTATATASVKEDVVQALGLVNCIVFRQSFNRPNLWYSVIPK
TKKCVEDIDKFIKENHFDECGIIYCLSRMDCEKVAEKLQECGHKAAFYHGSMDPAQRAFT
QKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVL
YYSYSDYIRLKHMISLGVAEQTPLTSGYNRVNTANSGRILETNTENILRMVSYCENDVDC
RRLLQLVHFGEKFDSANCKKTCDNCLKNKSLIEKDVTGIAKQLVELVKLMGQQFSSSHIL
EVYRGSLSQFVKKHRHETLSLHGAGKHLDKGEASRILRHLVTEDFLVEDVKKSDVYGSVS
SILKVNESKAKNLFLGGQTIILRFHSSAKVVKLSKSGVTPAKGSLTFGKLSPPRIDTPAE
PQPEVDLNLSAKLYSALRMLRTILVKEAGEGVMAYHIFGNATLQHISKRIPRTKEELLEI
NGIGKAKVSKYGDRILETVESTIHEYYKTEKNNSGSNDSTDSMKRRRNSNSNQNTNFEDD
DFSRSTGRSKKRAVTEQKKTTEISNGMKPDSYNQCIDDDLDFYDYDFEMKGSNTKASSND
GRVLPLWSAAGNGIQS
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgactatggaaatgcacatgagccagagcaattcaggtcaaaggctcaaatgtgatgat
aacctacctaaagttaatttgtcacaacatgctaatgcacatgataatttcttaagccaa
aataagtttttgagttcaaatttccttttttcgttgtcctcacaaaaacctggtgctgaa
ggagcaatgtgggcacgggcaatggacttccaaagtcaaaatattgcaaggttgcagagc
cagagggcacaagtggaaaaggcttggcatactctttccaatcttcagatttcttgcagg
aagtacacaaaacctggaaaaactgtacaggttaaggatcttcataataatgtatctcac
agtgttggaggaagaactatttcccaaagcacatttagcattgaaagaagcttggaaggt
atgcaaacacataaaaatttcagcgaaaccaacagcaagattagtcaacccggaaggtcc
atgggcaataatttttcatcaagtaatgttagagccatggaagctgaaaagagtcagata
agagcatcaatagtcaacaattctcattctcagaatttggatagatcattcaacaatcat
actgttcatattgaccaagtaaaagagtctgcaggaatttttgctggtaacctggatgat
gatgacatacttgagaatattgatgtggacaatatagtggaacggtaccaatcaacttgc
acaccacaaccatcaatttctaagctgccgcccattactccaactatagataaagataat
ttttctaggcaagatgaaagtagtttgccactggaattgtgctcaaactgcagtcatggt
cttaagctaggactgtgccccgaagctacgactcatttgcaggaaatgaaggacatgcta
atcgttatatcaaatgaactgcttgataatgttaatgaactcacctcagagcacattgag
aagcttcgccaagataggtcacagctaaataagcaaattcagcagcttgatgggtatctt
cgtgccaattcagtcgacgaggaaagacaaagatcacattattctacatccacaacagcc
atcaggtcatttcaatatgaaacacctcaagcagctgctttcaagacgccaatgagattt
gaagcccaggtaaatctgaataatgagctgggagggaatgaaaggtggaattcattctcc
tctgtagatagatttgatgtttcatcaggccctttggaaagggaaccgtatgttcctaag
tatgttgaagttaattatattgaaggttctaatgacaaaaagtggagtagtcagaacttc
ccatgggcaaagaagctggaggccaataacaagaaagtgtttgggaaccactcttttcgc
cccaaccaaagagaggttattaatgctacaatgagtggttgtgatgttttcgttctaatg
cccactggagggggaaagagtttgacatatcagctccctgctcttatctgtccaggtata
acattggtaatttctcccctcgtgtcactgattcaagatcagataatgcatctattgcag
gcgaacatacctgctgcttacttaagtggcaatatggaatggacagaacagcaggagatc
cttagagagctatgctctgattactgtaaatacaagctattatatgtgacaccagagaaa
gttgccagaagtgatgttcttttgaggcacctggagagtttacatgctcgggaattgctt
gccagggttgttattgatgaagctcattgtgtgagccagtgggggcatgattttagacca
gattatcagggtcttggtatcttgaaacagaagttccaaaatactcctgtgttagcttta
acagctactgcaacagccagtgtaaaagaagatgttgtgcaggctctaggccttgtcaac
tgcattgttttccggcaaagttttaatcgcccaaatttatggtattctgttatccccaag
actaagaagtgtgtggaagacattgacaaattcatcaaagaaaaccactttgatgaatgt
ggaataatttattgtctttcaagaatggactgtgaaaaagtagctgaaaagttacaggaa
tgtggacataaagcggcattctaccatggtagcatggatccagctcaacgtgcctttacc
caaaagcaatggagcaaagatgaaatcaatataatttgtgctacggtggcatttggaatg
ggtatcaacaagccagatgtccgctttgtaattcatcattctctcccaaaatctattgaa
ggttaccaccaggagtgtggccgagctggtagagatggtcagcggtcatcttgtgtgttg
tattacagttatagtgactatataagactcaagcatatgattagcctaggagtagcagag
caaactccattgacatctggatataatcgcgtcaacactgctaattcagggaggatactg
gaaacaaataccgaaaatattttgcgcatggtcagttattgtgaaaatgatgttgattgt
cgacgtcttctacagcttgttcattttggagagaagttcgattctgcaaactgtaaaaaa
acctgtgacaattgtttgaagaataaaagtttaattgagaaggatgtcacaggcattgca
aagcaattggttgaactggtgaagttaatggggcagcagttttcatcatctcatatttta
gaagtctataggggatccttaagccaatttgtcaagaagcacagacatgagactttaagc
ctgcatggagctgggaaacatctagacaagggtgaagcttcccgtatattgcgtcatctt
gttactgaggatttccttgtggaagatgtcaagaaaagtgatgtttatggatctgtatca
tcaatattgaaggtgaacgagtccaaagctaaaaatctcttccttggcgggcagacaatc
atattaagattccattcctctgcgaaagtggttaaactgagcaaatctggagtgactcca
gcaaaaggctcattgacatttgggaagctaagtcctcctcgaattgacactcctgctgag
cctcaacctgaagtagacttgaatctctcagccaaactgtattcagctctgcgaatgctc
cgaactattcttgtcaaagaagctggggagggggtcatggcataccacatatttggtaat
gctacgctgcagcacatcagcaaaagaattcccagaacaaaggaagaacttcttgagatc
aatggcattggcaaggctaaggtaagcaagtacggagatcggatacttgaaaccgtcgag
tctaccatccacgaatactacaagacagagaaaaacaacagcggcagcaatgacagtact
gattcaatgaagaggagaaggaattcaaatagcaaccaaaatactaactttgaggatgat
gacttttccagaagtactggtagatcaaagaaaagagcagtaacggagcagaagaaaact
actgagatttctaatggtatgaagccagattcctacaaccaatgcatagatgatgaccta
gatttctatgattatgattttgaaatgaaaggttcaaatacaaaggctagttcgaacgat
ggaagagtgcttcctttgtggtcagcagctggaaacgggatacaatcttga
DBGET
integrated database retrieval system
