Quercus suber (cork oak): 112009880
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Entry
112009880 CDS
T05868
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC112009880
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
qsu03016
]
112009880
Enzymes [BR:
qsu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
112009880
Transfer RNA biogenesis [BR:
qsu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
112009880
Prokaryotic type
112009880
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF835
Mdm12
Motif
Other DBs
NCBI-GeneID:
112009880
NCBI-ProteinID:
XP_023898006
LinkDB
All DBs
Position
Unknown
AA seq
372 aa
AA seq
DB search
MTESPKHLLNTTSEAPQRPSKIAKTTTDSEDEEEQQEEQEQSEKPTNPNPRMQRYLVAIE
YIGTRFSGCQQQLNCRTVVGALQEAFHKFIGQPVSIFCSSRTDAGVHALSNVCHVDVERI
SKRKPGEVLPPHEPTVVKKAVNHFLQKNEGDVMVIDVRCVPADFHARFKAKERTYFYRLL
SGPESLSIFERDRAWHVPEELDLLAMQEACKVLVGHHDFSSFRAAGCQAKSPMRTLDELD
VSEVVSNPYFPSIIERRQNDQTQEDLHASSNTSETDLPLSSISIDVRQEASMVEDFGFGI
RRRHRCFVVTARSRSFLYHQVRLLVGVLKAVGTRELTIADVERILNAKTVTAASPMAPAC
GLYLGHVKYDLP
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaagtccaaagcacttgctaaacaccacctccgaggcccctcaacgaccctcc
aaaatagcaaaaaccaccaccgactccgaagacgaagaggaacaacaagaagaacaagaa
caatctgaaaagcccacgaatccaaatcctagaatgcaacggtacctggtcgcaatagag
tacattgggactcgtttctctgggtgccagcaacagctcaattgccgtacagtcgttggg
gctcttcaggaagcttttcataaatttattggccagccagtttctattttttgttcaagt
cgaacagatgcaggagtgcatgccttatcaaatgtttgtcatgtagatgttgaacgcata
agcaaaagaaagccaggtgaagtgttaccacctcatgaacctacagtggtcaaaaaagct
gtgaaccatttcttacagaagaatgaaggtgatgtaatggtgattgatgttcgatgtgtt
ccagctgattttcatgccaggttcaaagctaaagagcgcacgtacttttaccgcttgctc
tctgggccagaatctttgtcaatctttgagagagaccgagcatggcacgttcctgaggag
ttagatcttcttgctatgcaggaagcatgcaaagttcttgttggacatcatgattttagt
tcctttagagcagctggttgtcaggctaaatcaccaatgagaactttagatgaactagat
gtttctgaggtagtttcaaatccatatttcccgtcaataattgaaaggagacaaaatgat
caaacccaggaagatcttcatgcaagctccaacacgtctgagactgacctgcctcttagt
tctatttcaattgatgtaaggcaagaggcttcaatggtggaagattttggatttggcata
agaagaaggcatcgttgctttgtagtaacagcacgttcacgctcttttctttaccaccag
gttagactgcttgttggtgttctaaaagctgttggaactagagagttgacaattgcagat
gttgagagaatcctaaatgcaaagactgtgactgctgcaagtcccatggcccctgcatgc
ggtctctaccttggtcatgtgaaatatgatctgccctga
DBGET
integrated database retrieval system
