Quercus suber (cork oak): 112010467
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Entry
112010467 CDS
T05868
Name
(RefSeq) sm-like protein LSM8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03018
RNA degradation
qsu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112010467
09123 Folding, sorting and degradation
03018 RNA degradation
112010467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsu03019
]
112010467
03041 Spliceosome [BR:
qsu03041
]
112010467
Messenger RNA biogenesis [BR:
qsu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112010467
mRNA degradation factors
5'-3' decay
Lsm complex
112010467
Spliceosome [BR:
qsu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
112010467
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
112010467
NCBI-ProteinID:
XP_065634507
LinkDB
All DBs
Position
Unknown
AA seq
123 aa
AA seq
DB search
MSGGPGLESLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVYSTKVCILTMISL
QLQFVLLLCSLNGTNYTFTAPAVLGLYIIRGDNISVVGELDEELDAHLDLSKLRAHPLKP
VIH
NT seq
372 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtggccctggacttgaatctcttgtagatcaaacaatatcagttatcacaaat
gatggacggaacatagtgggagtcttaaaaggctttgaccaggctacaaatattatcctt
gatgaatctcatgagcgtgtctactccacaaaggtttgtatccttactatgataagcctt
cagttacagtttgttttactcctatgttcactgaatggaacaaattacacatttactgcc
cctgctgtgttgggtttgtatataatcaggggtgacaacataagcgtagttggggagctc
gatgaggagcttgatgctcatcttgatttgtcaaaactgagggctcatcctctcaagcct
gtcatccattaa
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