KEGG   Quercus suber (cork oak): 112010467
Entry
112010467         CDS       T05868                                 
Name
(RefSeq) sm-like protein LSM8
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
qsu  Quercus suber (cork oak)
Pathway
qsu03018  RNA degradation
qsu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:qsu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112010467
  09123 Folding, sorting and degradation
   03018 RNA degradation
    112010467
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:qsu03019]
    112010467
   03041 Spliceosome [BR:qsu03041]
    112010467
Messenger RNA biogenesis [BR:qsu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     112010467
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     112010467
Spliceosome [BR:qsu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    112010467
SSDB
Motif
Pfam: LSM DUF150_C
Other DBs
NCBI-GeneID: 112010467
NCBI-ProteinID: XP_065634507
LinkDB
Position
Unknown
AA seq 123 aa
MSGGPGLESLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVYSTKVCILTMISL
QLQFVLLLCSLNGTNYTFTAPAVLGLYIIRGDNISVVGELDEELDAHLDLSKLRAHPLKP
VIH
NT seq 372 nt   +upstreamnt  +downstreamnt
atgtcaggtggccctggacttgaatctcttgtagatcaaacaatatcagttatcacaaat
gatggacggaacatagtgggagtcttaaaaggctttgaccaggctacaaatattatcctt
gatgaatctcatgagcgtgtctactccacaaaggtttgtatccttactatgataagcctt
cagttacagtttgttttactcctatgttcactgaatggaacaaattacacatttactgcc
cctgctgtgttgggtttgtatataatcaggggtgacaacataagcgtagttggggagctc
gatgaggagcttgatgctcatcttgatttgtcaaaactgagggctcatcctctcaagcct
gtcatccattaa

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