Quercus suber (cork oak): 112010618
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Entry
112010618 CDS
T05868
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu00040
Pentose and glucuronate interconversions
qsu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112010618
Enzymes [BR:
qsu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
112010618
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
O-FucT
Beta_helix
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
112010618
NCBI-ProteinID:
XP_065625348
LinkDB
All DBs
Position
Unknown
AA seq
365 aa
AA seq
DB search
MMVALDYRVAIESDIFVPTYGGNTARVVEGHRRYLGFKTTIILDRGLLVNLIDEYKNGTI
SCDEFSQAIKDSWGIGLSNPFLWKAILEVSQNDGPGLLREGCRNKEPLWIVFEVLGTIHL
SSYLNVSSYMTIDGRGQRIKLTGKGLRMKECEHVIICNLEFEGGRGPDVDAIQIKPNSKH
IRIDRCTLREYDDGLIDITRESTDITVSRCHFLQHDKTMLIGADPSHIGDRCIRVTIHHC
FFDGTKQRHPRVRYGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGQKRVAIKYLT
KKATDKEEATTGCINSEGYLFISATQAGLLTKDTAHRMFHPSEHYPIWTVEPPTDALKQV
LQHCT
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgatggtagcgttggattatagagtagcaatagaaagtgacatttttgtgcctacatat
ggaggaaacacggcaagagttgtggaaggccaccgacggtacttggggttcaagacgaca
attattttagatagagggcttttagtaaatttgatagatgagtacaagaatggaacaata
agctgcgacgaattctcccaagcaatcaaagacagttggggcatcggcttgtcaaatcct
tttctttggaaggccattctagaggtttcccagaatgatgggccaggattacttcgtgaa
ggatgtcgtaataaagaaccactgtggattgtgttcgaagttttaggcaccattcatctc
tcttcttacttgaatgtgtcgtcttatatgaccattgatggccgaggccaaaggattaaa
ctcaccggcaaaggtttgaggatgaaggagtgtgaacatgtaattatatgcaatctggag
tttgaaggtggtagaggtcctgatgttgatgccatccaaatcaaacctaattcaaaacat
ataaggatagaccgctgcaccctccgtgaatatgatgatggactgatagatatcactagg
gaaagcacagatattactgtttctaggtgtcactttttacaacatgacaagacaatgctc
attggagcagacccttctcatattggcgacagatgcattcgagtgaccattcaccattgt
ttttttgatgggaccaaacagcggcatcctcgagttagatatgggaaagtgcatctttac
aacaattataccagaaactggggcatttatgctgtttgtgccagtgtggaatcacagata
tactcccaatgcaatatatatgaagcaggacaaaagagggtggcaattaaatatctcaca
aagaaggcaactgacaaggaggaggcaacaactggctgcataaactctgaagggtattta
ttcataagtgcaactcaagcagggctattgaccaaggatactgcacacagaatgtttcat
cctagcgagcactaccctatatggacagtggaaccgcccacggatgctcttaagcaagtt
ctccagcattgcacatga
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