Quercus suber (cork oak): 112010646
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Entry
112010646 CDS
T05868
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112010646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsu03021
]
112010646
03036 Chromosome and associated proteins [BR:
qsu03036
]
112010646
Transcription machinery [BR:
qsu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
112010646
Chromosome and associated proteins [BR:
qsu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
112010646
PBAF complex
112010646
GBAF(ncBAF) complex
112010646
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
VDE
Tyr_Deacylase
Motif
Other DBs
NCBI-GeneID:
112010646
NCBI-ProteinID:
XP_065628570
LinkDB
All DBs
Position
Unknown
AA seq
311 aa
AA seq
DB search
MGEASVRXVPKGLILGNLSFVGQYDLTLCARCYVRGNYRVGVNSSDFRRVEISEDMKTDW
TEKENLHLMEAILHYGDDWRRVAQHVGGRSEKECVAHFLKLPFGXEYLKHADSGEVDVKY
NQMKDHVDAECRLESSGASFPSKRLCLTPLADASNPIMAQAAFLSALAGVDVAEAAARAA
VTSLSQVGRGANKEPQGSLAKITKLQEADVTPNGDATGNASEGAFVEANSQLQKEELDVE
RAISRIAEVQMKEIQDKLVHFENLDMQMEKEWQQLEQMKNMLFVDQLTLLFHRSSAPKTD
ERMEQKSVRID
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagcttcagtcaganttgtgccaaaaggtctgatccttgggaatttgtctttt
gttgggcagtatgacttgactctttgtgcaagatgctatgtccgtgggaactaccgggtt
ggtgtcaactcttcggatttcaggcgggttgagatcagtgaagatatgaagacagattgg
acggagaaagaaaatttgcatcttatggaagctattttgcattatggtgatgactggagg
agggtggcacaacacgttggtggtagaagtgagaaggaatgcgttgctcatttccttaag
cttccttttgggnaggaatatcttaaacatgcagactccggggaggttgatgtcaaatat
aatcaaatgaaggatcatgttgatgctgaatgcagattagaaagttcgggtgcatcattc
cccagtaaaagactgtgtctcacacctcttgccgatgcaagcaacccaattatggctcag
gctgcatttctttcagcattggcgggtgtagatgttgcagaagctgctgcccgagcggca
gttacgagtctctctcaggtgggccgtggagctaataaagagcctcaaggttctcttgcc
aaaattacaaaattgcaagaagctgatgttacacctaatggcgatgccactgggaatgca
tcggaaggagcttttgtggaagcaaattcacagcttcagaaggaagagctggatgtggag
agagcaatttctaggattgcagaagttcagatgaaggagatccaagataagcttgttcat
tttgagaacctagatatgcagatggaaaaagaatggcaacaactggagcaaatgaagaac
atgctttttgttgatcagcttaccctcttgtttcatagaagttctgcaccaaaaactgac
gaacgcatggagcagaagagtgtaagaatagattga
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integrated database retrieval system
