Quercus suber (cork oak): 112010877
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Entry
112010877 CDS
T05868
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC112010877
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112010877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qsu04131
]
112010877
Membrane trafficking [BR:
qsu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
112010877
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
VPS8_N
TPR_Vps41
Clathrin
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
Beta-prop_WDR5
Beta-prop_EML
WD40_CDC20-Fz
Beta-prop_WDR3_1st
TPR_VPS8_2
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_RIG_2nd
Beta-prop_HPS5
WD40_Gbeta
Asd-4
ANAPC4_WD40
zf_RING_Vps8
Beta-prop_Aladin
Beta-prop_TEP1_2nd
zf-RING_Vps41
WD40_Prp19
Beta-prop_THOC3
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
112010877
NCBI-ProteinID:
XP_065621440
LinkDB
All DBs
Position
Unknown
AA seq
2277 aa
AA seq
DB search
MELDLDSFLNSTLTSDDDDENHHNLNSIPRRTIDEILNASDSSTSSPPTSPPSVYSRISD
PKHDQDDAVSVSTTKQPSSDFSSIPAQHHDENPSLQSRPGSSKPLPSLFRGVRSNAKPGA
ALAAAVAASRALPTPHAAAIKSRRAAFQKVLENSDVVSVSASDELSSNSEIRNAKEDEVL
EGVIGNEGSSAKEVVESEAQNVVQVDGLKVSSNHEELLQTSADSVPNFDVIEPRIGSSSI
SVEEEDENNVNVDENASVLDRSSEILNSEEDKVGHLEEKVEEESTIEALETQQQVNVLKD
TEVGGVGGSASSLSDITELVEERIGQLESRRISKRAEKKSRAASMKPLELAEELEKKHAS
TVLHWEEGAAAQPMRLEGVRRGSTTLGYFDLDADNAITRTISSQAFRRDHGSPQALAVHT
NYIAIGMSPSVYSRISDPKHDQDDAVSVSTTKQPSSDFSSIPAQHHDENPSLQSRPGSSK
PLPSLFRGVRSNAKPGAALAAAVAASRALPTPHAAAIKSTRAAFRKVLQNSDAVSVSASD
ELSSNCEIRNAKKDEVLEGVIGNEGSSAKEVVESEAQNVVQVDGLKVSSNHEELLQTSAD
SVPNFDIIEPRIGSSSISVEEEDENNVNVDDNASVLDRSSEILNSEEDKVDHLEEKVEEE
STIEALETQQQVNVLKDTEVGGVGGSASSLSDINELVEERIGQLESRRVSKRAEKKSRAA
SMQPLELAEELEKKHASTGLHWEEGAAAQPMRLEGVRRGSTTLGYFDLDADNAITRTISS
QAFRRDHGSPQALAVHTNYIAIGMSKGVILVVPSKYSGYNADHMDPKMSMLSLQGDRSHA
PVTSMCFNQQGDLLLAGYGDGHITVWDVQRSSSAKVITGEHTTPVVHTLFLGQDSQVTRQ
FKAVTGDSKGLVLLHAFSVVPLLNRFSIKTQCLLDGQKTGIVLSASPVLFDEFSGGASLS
FQGNNAVSSSSLGSMMGGVVGGDAGWKLFNEGSSLAEEGVVIFVTHQTALVVRLTPTLEV
YSQLSKPDGVREGSMPYTAWKCMTQSRSLPSENVPVEASERVYLLAIAWDRKVQVAKLIK
SELKVYGKWSLDSAAIGVAWLDDQTLVVLTSTGQLCLFAKDGTVILQTSFSLDGYGEDDL
VAYHTHFINIYGNPEKAFHNCIAVRGASVYILGPMHLAVSRLLPWKERIQVLWKAGDWMG
ALNMSLTLYDGQAHGVIDLPRTLDAVQEAIMPYLVELLLSYVDEVFSYILVAFCNQSEKM
EPLDNPNSRSSSVHSEIKEQYTCVGGVAVEFCVRIKRTDIVFDEIFSKFVAVQQRDTFLE
LLEPYILKDMLGSLPPEIMQALVEHYSSKGWLQRVEQCVLHMDISSLDFNQVVRLCREHG
LYGALVYLFNKGLDDFRAPLEELLVVLRNSQKESAAALVYRMLVYLKYCFSGLAFPPGQG
TLPPTRLPSLRTELLQFLLEHSDAPNSKAVSSLSSGGAYLNLYHLLQLDTEATLDVLRCA
FVEDEIPKPKLSLHDSADKNMEPKIENDNGCQNILVQDTVNSLICILNRDISQTERSDSE
DVSGLVEEWPSKKDIGHMFEFIAYYVACERANVSRSVLSQILEYLTSQNNFPTSVSSHHI
TSTGREKQVLALLEVVPEIDWNASSVLGLCEKAQFYQVCGFIHTIRHEYLAALDSYMKDV
DEPIHAFSFINKTLLQLSDNERAIFQSAVISRIPELVDLSREGTFLLFIGHFNKEGLHIL
SKLRSHPRSLFLYLKTVIEVHLSGTLNFSSLRQDDFVDPSNGIRLKDHSKGLEAYLEKIS
DFPKLMRNDPVEVTDDMIELYLELLCQYEPGSVLKFLETFDSYRVERCLCLCQEYGIIDA
ATFLLERVGYVGSALFLSLSGLDSKFVELDTAVGNVVSDVALSSAADTKHLRTVLNMKEV
NEIRNILNACIGLCQRNTPRLNPEESETLWFRLLDSFCEPLMDSYGDEMVSRGENHVPLL
TKSSVSHGDEACIVSWRISKSHRGAHILRKLFSQFIKEIVEGMIGYVRLPTIMSKLLSDN
GSQEFGDFKLTILGMLGIYVFERRILDTAKSLIEDDTFYTMSLLKKGASNAYAPRSPICC
ICNCLFSKNSSSFSIRVFNCGHATHLQCEVPENEASNRGASSGCPVCIPKKKSHKARNKS
ILAENGLVSKFSSRPQQSHGTSILHPHESDALENFYGLQQISRFEILTNLQKDQRLVQIE
HMPLLRLAPPAVYHERVKKGTDIFTGDSSNGLAKIEKQSKSKQLRELRVKGSSLRFP
NT seq
6834 nt
NT seq
+upstream
nt +downstream
nt
atggaactcgacctcgactccttccttaactcaactctcaccagcgacgacgacgacgaa
aatcaccacaacctcaactccatccctcgccgtacaatcgacgaaatcctcaacgcctcc
gattcctcaacctcatctccccctacatctccaccgtccgtttactcccgcatctccgat
cccaaacacgaccaagacgacgccgtttcagtctccacaactaaacaaccctcttcagac
ttttcctccataccggcccaacatcatgatgaaaacccatcgctccagtcccggcccggt
tcctcgaagccgttaccgtcgcttttccgcggtgtgagatcgaatgcgaagccgggggca
gcgcttgcggcggcagtggcagcctccagggctctcccgaccccgcacgccgccgcgatc
aagtcgaggagggctgccttccagaaggttcttgaaaattccgatgtggtttcggtctcg
gcctcggatgaattgagctctaatagtgaaattcgtaatgcgaaagaggatgaggttttg
gaaggtgtgattgggaatgagggttctagtgctaaggaggtcgtcgaaagcgaagcccaa
aatgtggttcaagtagatggattaaaggttagtagtaatcatgaagaattgctgcaaaca
agtgctgattcagttcctaattttgatgtcattgagccgcggattggttcttcgtccata
agtgttgaggaggaggacgaaaacaatgtaaatgtagatgaaaatgcttctgtgcttgac
aggagctctgaaattttgaactcagaggaagacaaggttggtcatttggaagagaaggta
gaggaggaatcaacaattgaggcattggaaacacagcaacaagtgaatgttttgaaagat
actgaggtgggtggtgttggtggtagcgcaagttcattgagtgatattactgaacttgtg
gaagagagaattgggcaattggagagcaggaggattagtaagagagcggagaagaaatcc
cgggctgcttcaatgaagccattggagttagctgaggagcttgagaagaagcatgcttct
actgttttgcattgggaagagggtgcagctgctcagccaatgaggcttgagggcgtacgg
agaggatcaaccacattaggatactttgaccttgacgcggataatgctattacaaggacc
atttcttctcaggcattcaggagagatcatggttcccctcaagctttggctgttcatact
aattatattgcaattggaatgtcaccgtccgtttactcccgcatctccgatcccaaacac
gaccaagacgacgccgtttcagtctccacaactaaacaaccctcttcagacttttcctcc
ataccggcccaacatcatgatgaaaacccatcgctccagtcccggcccggttcctccaag
ccgttaccgtcgcttttccgcggtgtgagatcgaatgcgaagcccggggcagcgcttgcg
gcggcagtggcagcctccagggctctcccgaccccgcacgccgccgcgatcaagtcgacg
agggctgccttccggaaggttcttcaaaattccgatgcggtttcggtctcggcctcagat
gaattgagctctaattgtgaaattcgtaatgcgaaaaaggatgaggttttggaaggtgtg
attgggaatgagggttctagtgctaaggaggtcgtcgaaagcgaagcccaaaatgtggtt
caagtagatggattaaaggttagtagtaatcatgaagaattgctgcaaacaagtgctgat
tcggttcctaattttgatatcattgagccgcggattggttcttcgtccataagtgttgag
gaggaggacgaaaacaatgtaaatgtagatgacaatgcttctgtgcttgacaggagctct
gaaattttgaactcagaagaagacaaggttgatcatttggaagagaaggtagaggaggaa
tccacaattgaggcattggaaacacagcaacaagtgaatgttttgaaagatactgaggtg
ggtggtgttggtggtagcgcaagttcattgagtgatattaatgaacttgtggaagagaga
attgggcaattggagagcaggagggttagtaagagagcggagaagaaatcccgggctgct
tctatgcagccattggagttagctgaggagcttgagaagaagcatgcttctactggtttg
cattgggaagagggtgcagctgctcagccaatgaggcttgagggcgtacggagaggatca
accacattaggatactttgaccttgatgcggataatgctattacaaggaccatttcttct
caggcattcaggagagatcatggttcccctcaagctttggctgttcatactaattatatt
gcaattggaatgtcaaaaggggtcattcttgttgtgcccagtaaatattctggttataat
gctgaccacatggatccaaagatgtcgatgctcagtctgcaaggggataggtctcatgcc
cctgtaacttccatgtgctttaatcagcaaggggacctgctcttagctggttatggtgat
ggtcatattactgtttgggatgtgcagagatcatcatcagcaaaagttattactggagag
catacaacaccagtagtacatacgttatttctggggcaggattctcaggttactcgtcaa
tttaaagcagttactggtgatagtaagggtctcgttctgttgcatgctttctcagttgtt
cccttgctcaataggttctccatcaaaacccagtgtcttcttgatggacaaaaaacagga
attgtgctatcagcttcaccggtcctttttgatgaattctctggaggtgcttccctgtcc
tttcagggaaacaatgcagtttcatccagcagtcttggtagtatgatgggaggtgtagta
ggtggagatgctggctggaaactctttaatgaaggctcttctttagctgaagaaggtgtg
gtcatatttgtcacccatcaaactgctctggtggtaaggcttactcctactttggaagtc
tattcgcagctttctaagccagatggggttcgagagggttctatgccttatactgcgtgg
aaatgcatgacacaatcacgcagtttgcctagtgaaaacgtgcctgtagaagcatcagag
agagtctacttgctcgcaattgcttgggaccgaaaagttcaggttgcaaagttaatcaaa
tcagagctaaaagtatatgggaaatggtctcttgacagtgcagctataggtgtggcttgg
ttggatgatcagacactggttgttcttacatcaactggacaactctgtctctttgctaag
gatggaactgtgattctccaaacaagtttttctctggatggttatggtgaagatgatctt
gttgcataccatacccactttattaatatctatggaaatcctgagaaagcttttcacaat
tgcatagctgtaagaggagcttcagtatacatccttggacctatgcatcttgctgtttct
cgccttctcccatggaaggaacggattcaggttctgtggaaagcgggtgactggatgggt
gcactgaacatgtcactgacactttatgatggccaggcgcatggtgttattgacctccct
agaaccttggatgctgtacaggaggccataatgccctaccttgttgagttacttttgtca
tatgtagatgaagtattttcttatattttggtggcattttgcaaccaaagtgagaaaatg
gaaccactggacaacccaaatagtagaagcagttctgtgcactctgaaataaaagagcaa
tacacttgtgttggtggagttgctgtggaattctgtgttcgtatcaagaggactgacatc
gtttttgatgaaattttctccaagtttgtggcggtacaacagagagacacatttttggag
cttttggaaccatatatattgaaggacatgcttggatcactacctcctgagattatgcaa
gcacttgtagaacattacagcagcaaaggatggttacaacgagttgaacaatgcgtcctt
cacatggatatctcttctttggatttcaatcaggttgttaggttatgtagagagcatgga
ttatatggtgctctggtgtatctgttcaataaaggattggatgattttagggctccttta
gaggagctgttggtggtcttgcgaaatagtcaaaaggagagtgctgctgcccttgtgtac
cggatgcttgtttatctaaaatactgcttttcaggtcttgcttttcctccaggacaagga
actctgccccctacacgcttgccatctcttagaacagaacttctgcagtttctgttagaa
cattctgatgcccctaactcaaaagctgtttcaagcttatcatctggaggagcatacctg
aacctgtaccatctcttacagttagatactgaagctactttagatgttctgagatgtgct
tttgtagaagatgaaatcccaaaacccaaactttcattgcatgattcagcagataaaaat
atggagccaaaaatagagaatgacaatggatgtcaaaatatcttggtccaagatacagtg
aactctcttatttgtattcttaatagggacatttcccaaacagagaggtcagatagtgaa
gatgtcagtggattggttgaagaatggccttctaagaaagacataggccatatgtttgag
tttatagcatactatgttgcatgtgaaagagctaatgtctcgagaagtgtcctgagtcag
attttagaatacttgacatcacaaaataattttccaactagtgtttcctcacatcacata
acttcaacaggaagggagaagcaggtgcttgcccttctagaagtagtgcctgagattgac
tggaatgcttcttctgtattaggcctatgtgagaaagcacaattttaccaggtttgtggc
ttcattcatactatcagacatgagtatcttgctgctttggatagctacatgaaggatgta
gatgaacccattcatgctttctcctttatcaacaaaacattattacagctgagtgataat
gaacgtgctatttttcaatcagcggtcatttctcgtatacctgagctggttgatttaagc
agagagggaacattcttgttgttcatcggtcatttcaacaaagaaggtttgcatattctg
tctaaactccgctctcatccaagaagcctattcctttatttaaaaacggtcattgaggtt
cacttatctggcactctcaatttttcttctttaagacaagatgattttgtggatccttct
aatggaataaggttgaaggatcattcaaaaggacttgaggcttacttggaaaaaatctct
gatttccccaagttaatgcgtaatgatccggttgaagtgactgatgatatgattgagctt
tacttggagctattatgtcagtatgaacctggttcagttctcaaattccttgagaccttt
gatagctatcgtgtggaacgctgtctatgcctgtgtcaggaatatgggattatagatgct
gctaccttcttgttagaaagggttggttatgtggggagtgctcttttcctttcactttca
ggccttgacagtaaatttgttgagcttgatactgctgttggaaatgtggtttctgatgtg
gctttgagttctgctgctgatacaaagcatctcaggactgtattaaatatgaaggaggtg
aatgaaatacgcaatatattgaatgcctgtattggattatgtcagcggaacacccctcgc
ttgaaccctgaggagtcagagacgctctggttcagattacttgactcgttttgtgaacct
ttgatggattcatatggtgatgaaatggtatctagaggagaaaatcatgttccactgctg
accaaatcatcagtctcacatggggatgaagcatgcatagttagttggagaatatcaaaa
tcgcacagaggggctcatatcttgaggaaattgttctctcagttcataaaagagattgtt
gagggaatgataggatatgttcgccttccaaccatcatgtccaaactcctctctgataat
ggcagccaggaatttggtgattttaaacttaccatactgggcatgctcggaatatatgtc
tttgaaaggcgaattctggacactgccaaatccttaatagaggatgatacattctatacc
atgagcttacttaagaagggggcctctaatgcgtatgcaccccggagtcctatatgttgt
atatgtaattgccttttctcgaagaattcttctagctttagcattcgtgtttttaattgt
ggtcatgcaacacatcttcaatgtgaagttccggaaaatgaggcatcaaatagaggtgcc
tcatctggatgcccagtttgtataccaaagaagaaatctcacaaagcaagaaataaatcg
attcttgcagaaaatggtttagtaagtaaattttcgtccaggccacaacaatcacatgga
actagtattctacacccccatgaaagtgatgcattagagaatttctatgggcttcagcaa
atttcacggtttgagatcttgactaatttgcagaaggaccagagattagttcaaatagaa
cacatgcctctgttgaggcttgcaccgccagctgtttatcatgaaagggtaaagaaagga
acagatatttttacaggagacagtagcaacggccttgcgaaaatagagaaacaaagtaaa
agcaagcaattaagggagctaagagtaaaaggatcatctcttcggttcccttaa
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integrated database retrieval system
