Quercus suber (cork oak): 112010942
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Entry
112010942 CDS
T05868
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2 isoform X3
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qsu04131
]
112010942
04121 Ubiquitin system [BR:
qsu04121
]
112010942
Enzymes [BR:
qsu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112010942
Membrane trafficking [BR:
qsu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
112010942
Ubiquitin system [BR:
qsu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112010942
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
Rad50_zn_hook
Zn_ribbon_GTF2H2
Prok-RING_1
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
112010942
NCBI-ProteinID:
XP_023899090
LinkDB
All DBs
Position
Unknown
AA seq
388 aa
AA seq
DB search
MSSSPTTSYWCYRCSRFVRMWVHDNNITCPHCHGGFVEEIDTVPSPPPQSEILHRRFPPS
TMYLFGSTAQDPNPTRRSRRNPGNRSPFNPVIVLRGGVASTSDSEPAVADADAIGVERID
NANGFDRLLDQLTQIEVTGFGRPENPPASKAAIESLPTIEIVETHVSAESHCAVCKEQFE
LGSDAREMPCKHIYHSDCILPWLSLRNSCPVCRHELPSERERSRNESEAEISVEAEETVG
LTIWRLPGGGFAVGRFAGGGRRAGDRELPVVYTEMDGGFGGSGSGAPRRVSRVRRSSGSN
SRIGGGESGGFRRVFRNLFSFLRLRRSSSSSSSSSNFNYSYSSSSSQSGSESGSMRASQN
HSGSVFSRYVRRRSRAWAVEDQSENGRY
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgtctccgacaacgtcgtattggtgttacagatgctctcgctttgtccgtatg
tgggtacacgacaacaacataacctgtccacactgtcacggcggattcgtcgaggaaatc
gacaccgttccttcccctcctcctcaatcggaaattctccaccgtcgatttcctccctct
accatgtacttattcggatccaccgcacaggacccgaatccgacccgacgatctcgtcgc
aacccgggtaaccgctcacccttcaaccctgtcatcgtcttgcgtggcggtgttgcttcg
acttccgattcggaacccgccgtcgccgacgccgacgcaattggagtagagaggatcgat
aacgccaacggttttgacaggttactggaccagttgacccagattgaagtaaccgggttc
gggcgacccgagaacccgccggcgtcaaaagcagcgatagagtctctccccaccatcgaa
atcgtcgagacccacgtctcggccgagtcgcactgcgcggtctgcaaggaacagttcgag
ctcggatccgatgctcgcgaaatgccttgcaagcacatataccactccgattgtatcctc
ccatggctctctctccgaaactcttgcccggtgtgccggcacgagttgccgagcgagcga
gagcgaagccgaaacgagagcgaggccgagatttcggtcgaggcggaggagacggtggga
ttgacgatttggaggttaccgggaggtgggtttgcggtggggaggttcgccggaggagga
agaagagccggagatagagaattgccggttgtgtacacggaaatggatggcgggttcggc
gggtcgggttccggggctccgagaagggtttcgagagtcagacggagtagcggtagtaat
agcagaattggtggaggagagagtggtgggtttcggagggtttttcgtaatttgttctcg
ttcttgaggttaagaaggtctagttctagttctagttctagttcgaatttcaattattct
tattcttcatcgtcttcgcaatctgggtctgaatctgggtctatgagagcaagtcagaat
cattctggttcagtgtttagtaggtacgtgcgaaggcggagcagagcttgggctgtggag
gatcaaagtgaaaatgggaggtattga
DBGET
integrated database retrieval system
