Quercus suber (cork oak): 112011646
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Entry
112011646 CDS
T05868
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein NUP54
KO
K14308
nuclear pore complex protein Nup54
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112011646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsu03019
]
112011646
Messenger RNA biogenesis [BR:
qsu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112011646
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Motif
Other DBs
NCBI-GeneID:
112011646
NCBI-ProteinID:
XP_023899779
LinkDB
All DBs
Position
Unknown
AA seq
374 aa
AA seq
DB search
MFGTPSSTPAFGTPSSTPAFGTPSSTPAFGTPSSTPAFGTPTTPSFAGGFGSSLFSTPFS
SQQQQQQQQQQQQQQQTSLFQQQSPSTGFGFQTTPFXTPQPTPFPNAQLTTQMAPVSPLP
FSLADRDIQAIVDAYKEEPGNPKYAFKHLLFSVTDPQFRVKPAGVSDIMWAEAMGKLEGM
ESADRERLWPQLVQGFKDLSQRLKLQDDVIVSDAERLRITQSNVKMLQRHLQADTLPLIE
RMRQKEQGLQRRLLRVMRMVEALEGKGFRLPLMKGEVELAEKLAAITRQLKGSGAELSRR
VQNLLTLSRVQANGIGAGGSVYLPGSTKIHEQSLVDMQEVVQQQTEAIARLGNVLKRDIR
DMEIIMAEDTDLTD
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgttcggcactccgtcctcaaccccagccttcggcactccatcctcaaccccagcattc
ggcactccttcctccaccccagcattcggtactccctcttcaactccagctttcggcact
ccaacgacgccgtctttcgccggcggtttcggctcttctctcttctccacaccattctct
tctcaacaacaacaacaacagcaacaacagcagcagcaacagcaacagacttcgttgttt
cagcaacagtcgccatctaccggtttcggcttccagacgacgccgtttnctacgccgcag
cccactcctttccccaatgcgcaattgactactcagatggctcctgtatctcctctccct
ttctctctcgccgatcgcgatattcaagcgattgtcgatgcatataaggaagagcctgga
aaccctaaatatgctttcaagcatttgttgttcagcgtaacggatccacagttcagggtg
aagcctgctggtgtatcagatattatgtgggcggaggcaatgggaaagctggaaggtatg
gaaagtgctgacagggaacgcctatggcctcagctcgttcagggttttaaggatctttca
caacgtctcaagctccaagatgatgtcattgtttcagatgctgagagattgcgaatcacc
caaagcaatgtgaagatgcttcaaagacatttgcaagctgacactcttccgttgattgaa
agaatgagacagaaagagcaaggtcttcaaaggcgacttttaagggtaatgagaatggtg
gaggcattggagggtaagggtttccgattacccttaatgaaaggggaagttgaattggct
gagaagttagctgcaataactagacagctgaaaggatctggagcagaactttctagaaga
gtacaaaacctgctgactttgtcccgtgttcaagcaaatggcattggtgctggaggttct
gtttatcttccaggatcaaccaaaatacatgaacagagtcttgttgatatgcaggaggtc
gtacaacagcagacggaggccattgctaggcttggcaatgttttgaagagagatatcagg
gacatggagatcattatggccgaggacacagacttgacagattga
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integrated database retrieval system
