Quercus suber (cork oak): 112011789
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Entry
112011789 CDS
T05868
Name
(RefSeq) ruvB-like protein 1
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112011789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
qsu03036
]
112011789
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
qsu03037
]
112011789
Enzymes [BR:
qsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
112011789
Chromosome and associated proteins [BR:
qsu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
112011789
Chromatin remodeling factors
SRCAP complex
112011789
INO80 complex
112011789
INO80 complex (yeast)
112011789
SWR1 complex
112011789
ASTRA complex
112011789
Cilium and associated proteins [BR:
qsu03037
]
Motile cilia and associated proteins
Dynein assembly factors
112011789
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
RuvB_N
AAA_22
AAA_5
AAA_16
AAA_18
AAA_19
Mg_chelatase
AAA_25
bpMoxR
DnaB_C
TsaE
AAA_28
Cdc6_lid
nSTAND3
AAA_11
NPHP3_N
ResIII
AAA_7
IstB_IS21
Zeta_toxin
NACHT
DUF5887
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
112011789
NCBI-ProteinID:
XP_065629106
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
MDRVRIEEVQSTTKKQRIATHTHIKGLGLEASGRALPLAAGFVGQAEAREASGLVVDMIR
QKKMAGRALLLAGPPGTGKTALALGIAQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFR
RAIGLRIKENKEVYEGEVTELSPEEAESVTGGYGKSISHVIIGLKTVKGTKQLKLDPTIY
DALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEIVQD
VTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYIDEGVAELVPG
VLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGFCNVRGTDMNCPHGIPVDLLDRL
VIIRTQTYDVADMIKILALRANVEDLVIDDESLAYLGDIGLQASLRHAVQLLSPSSIMAK
MNGRDNICKADIEEVKALYMDAKSSARLLQAQQEKYIS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggatagagtgaggatagaagaggtccagtccactacgaagaagcagcgcattgctact
cacactcacatcaaaggtcttggccttgaggccagtggaagagcattgcccttggctgct
gggtttgtgggtcaggcagaggcaagggaagcatctggtcttgtagttgatatgatacgg
cagaagaaaatggctgggcgggcacttctactggctgggcctcctggtactggaaagaca
gctctggctcttggaatagcacaggaacttgggagcaaggttccattctgcccaatggtt
gggtcagaagtttactcatcagaagtaaagaaaactgaggttttgatggaaaactttcga
cgggccattggtctacgtatcaaggaaaataaagaagtctatgaaggagaggttactgaa
ctttccccagaagaagctgagagtgtgacaggtggctatggtaaaagtattagccatgtg
atcattggattaaaaactgtgaaaggaaccaagcaactgaagttggacccaaccatttat
gatgccttgatcaaggagaaggtggctgttggtgatgttatatacattgaagcaaatagt
ggagcagtaaagagggtgggcagaagtgacgcttttgctacagaatttgaccttgaagca
gaagagtatgttccacttcctaaaggagaggttcacaaaaagaaggagatagttcaggat
gtaacactacatgatctggatgctgcaaatgcacggcctcaaggtgggcaagatatactg
tcactaatggggcagatgatgaagcctaggaaaacagaaatcactgacaagttaagacaa
gaaattaataaggttgttaaccggtacattgatgaaggtgtagcagaacttgtccctgga
gttctattcattgatgaggtacatatgctggatatggaatgcttttcatacttgaatcgt
gctttagagagctcactatctccaatagtaatctttgccacaaacagagggttttgcaat
gtgagagggactgatatgaactgtcctcatggcatacctgttgacttgttggaccggttg
gttattatccgaacacagacttatgatgttgctgacatgataaagattttggctctccgt
gcaaatgtggaggacctagttatagatgacgaaagtttggcttacctgggtgacattggt
ctacaagcatccttaaggcatgcagttcagctgttatcgccctccagtattatggcaaaa
atgaatggccgcgataatatctgcaaggcagatattgaggaagtgaaagctctctatatg
gatgcaaagtcttcagcaagacttcttcaagcgcagcaggaaaaatacatttcatga
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