Quercus suber (cork oak): 112011848
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Entry
112011848 CDS
T05868
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsu03021
]
112011848
Transcription machinery [BR:
qsu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
112011848
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Motif
Other DBs
NCBI-GeneID:
112011848
NCBI-ProteinID:
XP_023899953
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MGVVTVSSSASRTPLGLGAKFSGQRSTLKRPLIVAFKVDKPNSTAAGAPQAQIPLPIEIH
KDHKKRLVKANKPLRRVKAVLTDEASPCTLEVDYNEAAAQLENIYKLSPTTDTSDVETVD
GTRKSWGRRRKIIEGDSKAENRTSNSVIKNRIKKVQRLNLDKRIALKKNKENEVVTLLRK
RKVIKNENARIEKLVREYSASTDLVSLDWRKMKIPPVLPSSEHAWLFKLMQPMKALLEVK
DNLQKDLGREPTEGELAEATNMNMVQVRKHMEVGRAARNKLIKHNLRLILFVIKKYFQEF
ANGPKFQDLCQAGVKGLITGIDRFEPKRKFRLSTYTLFWIRHAIIRSMTLSSFTRVSFGL
ESVRVEIQRAKLELLFELHRLPTKDEIIKKVGISPERYHEVLKASKPVLSLHSRHATTQE
EYINGIPDVDGVGAENWKQPALQRLALDDVLDSLKPKESLVIRQRFGLDGKGDRTLGEIA
GNLNISREMVRKHEVKALMKLKHPARVDYLRQHIA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtttctagctcagcttctcgaactccattaggactgggtgcaaaa
ttctcaggtcaacgctctacattgaaaagacccttgatagtagcgttcaaagtagataaa
cccaacagcacagcagcaggtgcacctcaggcgcaaatccctctgcccatagaaattcat
aaggatcataaaaagagactagtaaaagctaataagcctttgagaagagtaaaagctgtc
cttacagatgaagcttctccgtgtaccttggaagtggattacaatgaagccgccgcccaa
cttgaaaacatatacaagcttagcccaacaacggatacttctgatgtggaaactgtagat
ggcacaagaaaaagctggggaaggaggaggaagattattgaaggtgattcaaaagcagaa
aatagaactagtaatagtgttatcaagaaccgaataaagaaggttcagagattgaatctt
gacaaaaggattgcattgaaaaagaacaaagaaaatgaagtagttactctattacggaag
agaaaagttattaagaatgaaaatgcgaggattgagaagcttgtaagggagtactcggct
tctactgatttggttagtttggactggagaaagatgaagatacctccagttcttccttct
tcagagcatgcttggttgttcaagttgatgcaaccaatgaaggcactccttgaagtaaaa
gataatttgcaaaaagacttgggaagagaaccaacagaaggcgaattagctgaagcgaca
aatatgaacatggttcaagtacgtaaacacatggaggttggtcgagctgcaagaaataag
cttattaagcacaatctccgtctcattttgtttgtaataaaaaaatattttcaagaattt
gcaaatggaccaaaatttcaagacctttgtcaggcgggagtgaagggactcattacagga
attgatcgttttgaaccaaaaaggaaattccggctctcaacttatactctcttttggatc
aggcatgccattatacgctccatgacactctcaagctttactcgtgtttcatttggcctt
gaatcagtaagagtggaaatccagagagccaaacttgagttgttgtttgagcttcataga
ttaccaacaaaggacgagataataaaaaaagtggggatctcccctgagaggtatcatgaa
gttctgaaggcctcaaaacctgttttgtctctacattcaaggcatgcaaccacacaagag
gagtacataaatgggatcccggatgttgacggtgttggagctgaaaactggaagcaacct
gctcttcaaaggcttgctcttgacgatgtgcttgattccttgaagcccaaggagagcttg
gttatcagacagagatttgggcttgatgggaaaggtgatagaacattgggagagattgct
ggcaacttaaatatttcaagagaaatggttcggaagcatgaagttaaggctctcatgaag
ctcaagcatccagctcgagtggattatcttcgccaacatatagcataa
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