Quercus suber (cork oak): 112012306
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Entry
112012306 CDS
T05868
Name
(RefSeq) serine hydroxymethyltransferase 4
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu00260
Glycine, serine and threonine metabolism
qsu00460
Cyanoamino acid metabolism
qsu00630
Glyoxylate and dicarboxylate metabolism
qsu00670
One carbon pool by folate
qsu01100
Metabolic pathways
qsu01110
Biosynthesis of secondary metabolites
qsu01200
Carbon metabolism
qsu01230
Biosynthesis of amino acids
qsu01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
112012306
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
112012306
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
112012306
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
112012306
Enzymes [BR:
qsu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
112012306
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Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
112012306
NCBI-ProteinID:
XP_023900467
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All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MDPVNAWGNTPLKAVDPDIHDLIENEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS
EGMPGNRYYGGNEFIDEIENLCRSRALQTYRLDPTQWGVNVQPYSGSPANFAAYTAVLQP
HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSTTGYIDYDKLEEKALDF
RPRLIICGGSAYPRDWDYARFRSIADKCGALLLCDMAHISGLVAAQEAANPFDYCDIVTT
TTHKSLRGPRAGMIFYRKGPKPAKKGQPEDAVYDFEDKINFAVFPSLQGGPHNHQIGALA
VALKQAMTPGFKAYAKQVKANAVALGNYLMGKGYKLVTGGTENHLVLWDLRPLGLTGNKV
EKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLVEKDFEQIGEFLHRAVCVTL
SIQKEHGKLLKDFNKGLVNNKDIEALKADVEKFSSTFDMPGFLMSEMKYQD
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggatcccgtgaacgcttggggaaacacacctctgaaagcagtggatccagatatccac
gatctaatcgagaatgagaagcgtcgtcaatgccgtggcatcgagctcatcgcttccgag
aacttcacctccttcgctgtgattgaagccttaggcagtgccctgaccaacaaatactca
gaaggcatgcccggtaaccgatactacggaggtaacgaattcatcgacgagatcgagaat
ctctgccgatctcgagccctccaaacctaccgtctcgacccaacccaatggggtgtcaat
gtacagccatattcaggttcgccagctaacttcgctgcctacaccgctgtgcttcaacca
catgatcgtatcatgggtttggatcttccatctgggggtcatttgacacatgggtattac
acctctggtgggaagaagatctctgctacctccatttacttcgagagtttgccttataag
gtgaattccacaactgggtatatcgattatgataagttagaggagaaggccttggatttc
aggccaaggttgatcatttgtggtgggagtgcatatccaagggactgggattatgctagg
ttccgttctattgctgacaagtgtggagcccttttgctttgtgacatggctcacattagt
ggtctcgttgctgctcaggaagctgcaaacccctttgactactgtgacatagtgacaacc
acaacccacaagagcttgaggggtcccagggctggtatgatcttctacaggaaagggcca
aagccagctaagaagggccagccagaggatgcagtttacgattttgaagacaagatcaac
tttgctgtcttcccatcccttcagggtggtcctcacaatcaccagattggtgcacttgct
gttgctttaaaacaggccatgacacctggcttcaaggcctatgccaaacaagttaaggcc
aatgcagttgcccttggaaactacctcatgggcaagggatacaagcttgtcactggggga
actgagaaccaccttgttctctgggatcttcgccctcttggcttgactggcaataaggtt
gagaagctctgtgacttgtgcaatattactgtgaacaagaatgccgtgtttggtgacagc
agtgccttggctcctggaggagtaagaattggtaccccggccatgacttcaagaggattg
gttgagaaggactttgagcagataggcgagttccttcaccgagctgtttgtgtcaccttg
agcatccaaaaggagcatggaaagctattgaaggacttcaacaagggcctggtgaataac
aaggacattgaagccctcaaggccgatgttgagaagttttcatccacctttgacatgcct
ggcttcctgatgtctgagatgaagtaccaggattag
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