Quercus suber (cork oak): 112012829
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Entry
112012829 CDS
T05868
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1-like isoform X1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qsu04131
]
112012829
Membrane trafficking [BR:
qsu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112012829
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
112012829
NCBI-ProteinID:
XP_023900972
LinkDB
All DBs
Position
Unknown
AA seq
1836 aa
AA seq
DB search
MLQLRHRRDSTPATTKWHNKFDENLEQWPHLNELVQCYTADWVKDDNKYGHYDTIGTPSF
SNQIYEGPDTDIETEMRLANARRTKVEDTTDDDLPSTSGRQFTETTSDVSVPKINLQHFG
PSPLPAYEPAFDWENERSMIFGQRISEAPLSHGLKISVKVQSLSFQAGLLEPFYGTICLY
NKERREKLSEDFHFRVLPTEMQDVKLSYEPRGIFYLDAPSASVCLLIQLERHATEEGGVT
SSVYSRKEPGHLSERERQKLQVWSQIMPYRESFAWAMVSLFDNSIGTATGGSASPSSPLA
PSVSGSSSHEGVFEPSTKITLDGKLGYSSGSSVIVEISNLSKVKESYTEDSLQDPKRKVH
KPVKGVLRLEIEKHQIGQADLDNISETGSVTNDSIDLGDRIADFTFRRFTNNGSDGPQSS
NSKWNLYDGKEISGNGSSLHGNADFSVDDFQAFDFRTTTRNEPFLQLFHCLYVYPLTVSL
SRKRNLFIRVELREDDTDIRRQPLEAMYPRELGASLQKWVNTQVAVGARVPSYHDEVKIA
LPAIWTPTHHLLFTFFHVDLQTKLEAPKPVVIGYASLPLSTHAQLRSEISLPIMKELVPH
YLQDTGRERLDYLEDGKNVFKLHLKLCSSLYPINERIRDFFLEYDRHTLRTSPPWGSELL
EAINSLKNVDSTALLQFLHPILNMLLHLIGNGGETLQVAAFRAMVNIVTRXXQESADDAE
RNHFLVNYVDYTFDDFGGRQAPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWFFLE
LIVKSMALEKTRLFYHNLPTDEDIPPMQLKEGVFRCIMQLYDCLLTEVHERCKKGLSLAK
RLNSSLAFFCYDLLSIIEPRQVFELVSLYLDKFSGVCQMVLHDCKLTFLQIICDHDLFVE
MPGRDPSDRNYLSSVLIQEIFLTWDHDDLSLRANAARILVVLLCKHEFDARYQKPEDKLY
IAQLYFPLIGQILDEMPVFYNLNAVEKREVLIVILQIVRNLDDASLVKAWQQSIARTRLF
FKLLEECLVLFEHRKPADGMLMGCSSRSPVGDGPASPKYSDRLSPAVNNYLSEASRQEVR
PQGTPENGYLWQRVNSQLSSPSQPYSLREALAQAQSSRIGASAQALRESLHPILRQKLEL
WEENLSASVNLQVLEITEKFSMMAASHSISTDYGKLDCITAILMSFFSRNQPLSFWKALF
PVFNNVFDLHGGTLMARENDRFLKQVTFHLLRLAVFRNESVRKRAVIGLQLLVKSSFYCF
MQTARLRVMLIITLSELMSDVQVTQMKPDGTLEESGEARRLRKSLEEMSDEAKSPNLLRE
CGLSDSALATIPERSEENRWSWSEVKYLSDSLLLALDGSLEHALLGSVMTMDRYAAAESF
YKLAMAFAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVVMQALVARNDGVWSKD
HVTALRKICPMVSNEITSEASAAEVEGYGASKLTVDSAVKYLQLANKLFSQAELYHFCAS
ILELVIPVYKSRRAYGQLAKCHTLLTSIYESILEQESSPIPFTDATYYRVGFYGDRFGKL
DRKEYVYREPRDVRLGDIMEKLSHIYESRMDGNHTLHIIPDSRQVKADELQPGVCYLQIT
AVDAVMEDEDLGSRRERIFSLSTGSVRARVFDRFLFDTPFTKNGKTQGGLEDQWKRRSVL
QTEGSFPALVNRLLVIKSESLEFSPVENAIGMIETRTAALRNELEEPRSSEGDQLPRLQS
LQRILQGSVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCKRAIRVHF
RLIGEEDQEFHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atgctccaactccggcaccgccgcgactccactccggccaccaccaagtggcacaacaag
ttcgatgagaatttggagcagtggccgcatctgaacgagctggtacaatgctacacggcg
gattgggttaaagacgacaacaagtacggccactacgacaccattggaacgccgtcgttt
tccaaccagatttatgaaggccccgatactgacattgagactgaaatgcgtcttgctaat
gcaaggcgaacaaaggtggaagatactactgatgatgaccttccgagtacctcaggaagg
caatttactgaaacaacctctgatgtgtctgttccaaagattaatttgcagcattttggc
ccgtctcctctccctgcatatgaaccagcgtttgattgggaaaatgagaggtcgatgata
tttggtcaaaggatttcagaagctcctctttcacatggattgaagatctctgtcaaggtt
cagtccctatcatttcaagcgggattattagagccattctatggtacaatttgcttatat
aataaggagagaagagaaaagttgtctgaggatttccattttcgtgtgttaccaactgaa
atgcaggatgtaaaactttcttatgaaccacgaggaatcttctatttggatgctccatcc
gcatcagtttgtcttttaatccagttagaaaggcatgccactgaagaaggcggagttaca
tcttctgtttattcacgtaaagaaccggggcatttgtcggagagagaaaggcagaaactg
caggtgtggtctcaaatcatgccttacagagaatcctttgcctgggctatggtttcgtta
tttgataacagcattggtacagctactggagggtctgcttcccccagcagccctcttgct
cctagtgtatctggctcaagttcccatgagggtgtgtttgagcctagtacaaagatcaca
ttagatggaaagctgggttattcaagtggaagctctgtcattgttgaaatttcaaacttg
agtaaagttaaagaaagctatactgaggactcgcttcaggatccgaaacggaaggttcat
aaacctgtgaaaggtgttttgcgactggaaattgagaagcaccagattggccaagctgac
ttggacaatatatcagaaactgggagtgtgaccaatgattccattgacctgggggaccgc
attgctgatttcacattcagaaggttcaccaataatggttctgatgggcctcagagtagt
aactcaaagtggaatttatatgatggtaaagaaatttctggaaatggatcgagtttgcat
ggaaatgctgatttcagtgttgatgatttccaagctttcgacttccgcacaacaacgaga
aatgaacctttcctgcagctttttcattgtctgtatgtatatcccttgacagttagttta
agtcggaagaggaatttgttcatacgggttgagctgagagaggatgatactgatattcgt
agacagcctttagaggcaatgtatccgagggagctaggtgcatcactacaaaagtgggtt
aacacgcaagttgctgttggggctagagtgccttcttaccatgacgaggttaaaattgct
ctccctgctatctggacgccaacacatcaccttttattcacattcttccatgttgatctt
cagacaaaactagaagctccaaagccagtggttattggatatgcatcacttccattatct
acacatgctcagttgcgatctgaaatttctttgccaattatgaaggagttggttccacat
tatctccaggacacaggaagggagaggctggattatttggaagatggaaaaaatgtcttt
aaactgcatttaaaactttgttcatctttataccccatcaatgagcgcattagagacttt
tttcttgaatatgacagacacacactgcgaacaagcccaccttggggttctgaacttctg
gaggccattaacagtttgaagaatgttgattccacagctttgcttcagtttcttcaccca
attttgaatatgcttctccatcttattggcaatggtggagaaaccctacaggttgcggcc
ttcagagccatggttaatattgtaactcggrtrcwacaggagtcggctgatgatgctgaa
cgaaatcattttctagttaactatgttgattatacttttgatgactttgggggtcgtcaa
gcaccagtatatcctggkttgtcaactgtctggggtagcttggcccgaagtaaggctaaa
ggctaccgtgttggaccagtatatgatgatgttttggcyatggcttggtttttccttgag
ctaattgtcaagtcaatggcattggagaagactcgtcttttctatcataaccttcccaca
gatgaagatatccctccaatgcaattgaaagaaggtgtctttagatgtataatgcagttg
tatgattgccttctaacagaagtgcatgagcgctgtaagaaggggttgagcttggcaaaa
cgtttgaatagcagtttggccttcttttgttatgatcttttgtccatcattgaacctcgc
caagtttttgaattggtttccttgtaccttgacaagttttctggggtgtgccaaatggtt
ctgcatgactgcaagcttacatttttgcagattatatgtgatcatgacctttttgtggaa
atgcctgggagagacccttcagataggaactacctttcatctgtcttgatacaggagatt
ttccttacttgggatcatgacgatttatctctgcgggcaaatgcagctagaatattagta
gtcctcttgtgcaagcatgagtttgatgctcgataccaaaagcctgaagataagctatat
attgcacagttatattttccactcattggacagatcctagatgaaatgcctgtcttttac
aacctaaatgccgttgaaaagcgtgaagttttaattgttattttgcaaattgtgcgcaat
cttgatgatgcatcacttgtaaaagcgtggcaacaaagcatcgctcggactagattattt
ttcaaactcttggaggaatgcttagttctttttgagcatagaaaacctgctgatggcatg
ctcatgggctgtagttctcgcagcccagttggggatgggcctgcttcccccaagtactct
gatagactttctcctgcagttaacaattatctatctgaggcatcaagacaagaagtcaga
cctcagggaacacctgaaaatggttatttatggcagagagtgaattcccaattaagctcc
cctagccagccatattccttgagagaagctctggctcaggcacagtcttctaggattgga
gcttctgcacaagcacttcgagaatctttgcacccgatattgagacaaaaattggagctt
tgggaagaaaacttgagtgcttctgtcaatctccaggttttggaaataacagagaaattt
tccatgatggctgcctcccatagcatctctactgactatggaaaacttgattgtataaca
gccatattaatgagcttcttttcccgaaatcaacctctgtctttctggaaagctttgttt
cctgtcttcaacaatgtctttgatcttcatggaggaactctaatggcaagggaaaatgat
cgtttcttaaagcaagtgactttccatctacttcgacttgcagttttccgaaatgaaagc
gtcaggaaaagggctgttattgggctccaattacttgtgaagagttccttctattgcttc
atgcagacagcaaggttaagggtcatgctgattatcacattatcggagctgatgtctgat
gtgcaagtgactcagatgaagcctgacggaacgctagaggaaagtggtgaagcacgacgg
cttagaaaatctttggaggaaatgtcagatgaagctaaaagccccaacctattgagggag
tgtggactttctgatagtgctctggcaacaattccagaaagatcggaagagaacaggtgg
tcctggtcagaggtgaaatatctctctgacagtcttcttcttgcccttgatggaagcttg
gagcatgcactattgggatctgtgatgactatggatagatatgcagctgctgaaagtttc
tacaaacttgcaatggcatttgcacctgtcccagatcttcacataatgtggttgctacat
ttatgtgatgcacatcaggaaatgcagtcttgggctgaagctgcccagtgtgctgtggct
gttgctggtgttgtgatgcaggcccttgtggctagaaacgatggtgtttggagcaaggat
catgtaactgctcttcgtaaaatttgcccaatggtgagcaatgagatcacatcagaggct
tctgctgctgaggtagagggatatggtgcttcaaagctcacagttgactccgcagtgaag
taccttcagcttgctaataagcttttctctcaagctgagctctatcacttctgtgccagc
attctcgagcttgtaattccagtttataaaagcaggagggcatatgggcagctggctaaa
tgtcacacattactcactagtatctatgaatcaattcttgagcaggaatcaagcccaatt
ccattcactgatgctacatactatcgggtgggattctatggtgatagatttgggaagctt
gatagaaaggagtatgtataccgggagccccgtgatgttcggctaggtgacataatggag
aaacttagtcatatatatgagtctaggatggatggcaatcacactttacacattattcca
gattcgagacaagtgaaggcagatgaattacagcctggagtctgctacctgcagataact
gctgttgatgcagtaatggaggatgaagatttgggaagtagaagggaaaggatcttttca
ctttccactggaagtgtccgtgcacgtgtgtttgaccgctttttgtttgataccccattt
acgaaaaatggcaagacccagggtggattggaagaccaatggaagaggcgaagtgtgctg
cagactgagggctccttccctgcccttgtgaataggctcttggtaattaaatctgaatct
cttgagttctccccagtagaaaatgcaattggaatgattgaaactcggacagctgcacta
cgaaatgagcttgaagagcctcgcagttctgaaggcgatcaactccctcgtctccagagt
ctacagagaattcttcaaggcagtgttgctgttcaagtgaacagtggagtcctgagtgtg
tgtacggccttcctgtctggtgagcccgcaacgaggctgcgttcacaggaattgcagcaa
ctcattgctgcacttcttgaattcatggctgtttgcaagcgggccattcgggtacacttc
agattgattggagaagaagaccaggaattccacacacagcttgtgaatggatttcagtcc
ctcactgcagagttatctcattacatccctgccattctctcagagctttga
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integrated database retrieval system
