Quercus suber (cork oak): 112012829
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Entry
112012829 CDS
T05868
Name
(RefSeq) LOW QUALITY PROTEIN: guanine nucleotide exchange factor SPIKE 1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qsu04131
]
112012829
Membrane trafficking [BR:
qsu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112012829
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
112012829
NCBI-ProteinID:
XP_065621262
LinkDB
All DBs
Position
Unknown
AA seq
1832 aa
AA seq
DB search
MLQLRHRRDSTPATTKWHNKFDENLEQWPHLNELVQCYTADWVKDDNKYGHYDTIGTPSF
SNQIYEGPDTDIETEMRLANARRAKVEDTTDDDLPSTSGRQFTETTSDVSVPKHFGPSPL
PAYEPAFDWENERSMIFGQRISEAPLSHGLKISVKVQSLSFQAGLLEPFYGTICLYNKER
REKLSEDFHFRVLPTEMQDEKLSYEPRGIFYLDAPSASVCLLIQLERHATEEGGVTSSVY
SRKEPGHLSERERQKLQVWSQIMPYRESFAWAMVSLFDNSIGTATGGSASPSSPLAPSVS
GSSSHEGVFEPSTKITLDGKLGYSSGSSVIVEISNLSKVKESYTEDSLQDPKRKVHKPVK
GVLRLEIEKHQIGQADLDNISETGSVTNDSIDLGDRIADSTFRRFTNNGSDGPQSSNSKW
NLYDGKEISGNGSSLHGNADFSVDDFQAFDFRTTTRNEPFLQLFHCLYVYPLTVSLSRKR
NLFIRVELREDDTDIRRQPLEAMYPRELGASLHKWVNTQVAVGARVPSYHDEVKIALPAI
WTPTHHLLFTFFHVDLQTKLEAPKPVVIGYASLPLSTHAQLRSEISLPIMKELVPHYLQE
NKRHLFGFFFFFFFFFFFFLKLCSSLYPINERIRDFFLEYDRHTLRTSPPWGSELLEAIN
SLKNVDSTALLQFLHPILNMLLHLIGNGGETLQVAAFRAMVNIVTRVQQESADDAERNHF
LVNYVDYTFDDFGGRQAPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWXFLELIVK
SMALEKTRLFYHNLPTDEDIPPMQLKEGVFRCIMQLYDCLLTEVHERCKKGLSLAKRLNS
SLAFFCYDLLSIIEPRQVFELVSLYLDKFSGXCQMVLHDCKXTFLQIICDHDLFVEMPGR
DPSDRNYLSSVLIQEIFLTWDHDDLSLRANAARILVVLLCKHEFDARYQKPEDKLYIAQL
YFPLIGQILDEMPVFYNLNAVEKREVLIVILQIVRNLDDASLVKAWQQSIARTRLFFKLL
EECLVLFEHRKPADGMLMGCSSRSPVGDGPASPKYSDRLSPAVNNYLSEASRQEVRPQGT
PENGYLWQRVNSQLSSPSQPYSLREALAQAQSSRIGASAQALRESLHPILRQKLELWEEN
LSASVNLQVLEITEKFSMMAASHSISTDYGKLDCITAILMSFFSRNQPLSFWKALFPVFN
NVFDLHGGTLMARENDRFLKQVTFHLLRLAVFRNESVRKRAVIGLQLLVKSSFYCFMQTA
RLRVMLIITLSELMSDVQVTQMKPDGTLEESGEARRLRKSLEEMSDEAKSPNLLRECGLS
DSALATIPERSEENRWSWSEVKYLSDSLLLALDGSLEHALLGSVMTMDRYAAAESFYKLA
MAFAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVVMQALVARNDGVWSKDHVTA
LRKICPMVSNEITSEASAAEVEGYGASKLTVDSAVKYLQLANKLFSQAELYHFCASILEL
VIPVYKSRRAYGQLAKCHTLLTSIYESILEQESSPIPFTDATYYRVGFYGDRFGKLDRKE
YVYREPRDVRLGDIMEKLSHIYESRMDGNHTLHIIPDSRQVKADELQPGVCYLQITAVDA
VMEDEDLGSRRERIFSLSTGSVRARVFDRFLFDTPFTKNGKTQGGLEDQWKRRSVLQTEG
SFPALVNRLLVIKSESLEFSPVENAIGMIETRTAALRNELEEPRSSEGDQLPRLQSLQRI
LQGSVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCKRAIRVHFRLIG
EEDQEFHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5499 nt
NT seq
+upstream
nt +downstream
nt
atgctccaactccggcaccgccgcgactccactccggccaccaccaagtggcacaacaag
ttcgatgagaatttggagcagtggccgcatctgaacgagctggtacaatgctacacggcg
gattgggttaaagacgacaacaagtacggccactacgacaccattggaacgccgtcgttt
tccaaccagatttatgaaggccccgacactgacattgagactgaaatgcgtcttgctaat
gcaaggcgagcaaaggtggaagatactactgatgatgaccttccgagtacctcaggaagg
caatttactgaaacaacctctgatgtgtctgttccaaagcattttggcccgtctcctctc
cctgcatatgaaccagcgtttgattgggaaaatgagaggtcgatgatatttggtcaaagg
atttcagaagctcctctttcacatggattgaagatctctgtcaaggttcagtccctatca
tttcaagcgggattattagagccattctatggtacaatttgcttatataataaggagaga
agagaaaagttgtctgaggatttccattttcgtgtgttaccaactgaaatgcaggatgaa
aaactttcttatgaaccacgaggaatcttctatttggatgctccatccgcatcagtttgt
cttttaatccagttagaaaggcatgccactgaagaaggcggagttacatcttctgtttat
tcacgtaaagaaccggggcatttgtcggagagagaaaggcagaaactgcaggtgtggtct
caaatcatgccttacagagaatcctttgcctgggctatggtttcgttatttgataacagc
attggtacagctactggagggtctgcttcccccagcagccctcttgctcctagtgtatct
ggctcaagttcccatgagggtgtgtttgagcctagtacaaagatcacattagatggaaag
ctgggttattcaagtggaagctctgtcattgttgaaatttcaaacttgagtaaagttaaa
gaaagctatactgaggactcgcttcaggatccgaaacggaaggttcataaacctgtgaaa
ggtgttttgcgactggaaattgagaagcaccagattggccaagctgacttggacaatata
tcagaaactgggagtgtgaccaatgattccattgacctgggggaccgcattgctgattcc
acattcagaaggttcaccaataatggttctgatgggcctcagagtagtaactcaaagtgg
aatttatatgatggtaaagaaatttctggaaatggatcgagtttgcatggaaatgctgat
ttcagtgttgatgatttccaagctttcgacttccgcacaacaacgagaaatgaacctttc
ctgcagctttttcattgtctgtatgtatatcccttgacggttagtttaagtcggaagagg
aatttgttcatacgggttgagctgagagaggatgatactgatattcgtagacagccttta
gaggcaatgtatccgagggagcttggtgcatcactacataagtgggttaacacgcaagtt
gctgttggggctagagtgccttcttaccatgacgaggttaaaattgctctccctgctatc
tggacgccaacacatcaccttttattcacattcttccatgttgatcttcagacaaaacta
gaagctccaaagccagtggttattggatatgcatcacttccattatctacacatgctcag
ttgcgatctgaaatttctttgccaattatgaaggagttggttccacattatctccaggag
aacaaaaggcatctctttggttttttttttttttttttttttttttttttttttttttta
aaactttgttcatctttataccccatcaatgagcgcattagagacttttttcttgaatat
gacagacacacactgcgaacaagcccaccttggggttctgaacttctggaggccattaac
agtttgaagaatgttgattccacagctttgcttcagtttcttcacccaattttgaatatg
cttctccatcttattggcaatggtggagaaaccctacaggttgcggccttcagagccatg
gttaatattgtaactcgggtgcaacaggagtcggctgatgatgctgaacgaaatcatttt
ctagttaactatgttgattatacttttgatgactttgggggtcgtcaagcaccagtatat
cctggtttgtcaactgtctggggtagcttggcccgaagtaaggctaaaggctaccgtgtt
ggaccagtatatgatgatgttttggccatggcttggnttttccttgagctaattgtcaag
tcaatggcattggagaagactcgtcttttctatcataaccttcccacagatgaagatatc
cctccaatgcaattgaaagaaggtgtctttagatgtataatgcagttgtatgattgcctt
ctaacagaagtgcatgagcgctgtaagaaggggttgagcttggcaaaacgtttgaatagc
agtttggccttcttttgttatgatcttttgtccatcattgaacctcgccaagtttttgaa
ttggtttccttgtaccttgacaagttttctgggntgtgccaaatggttctgcatgactgc
aagnctacatttttgcagattatatgtgatcatgacctttttgtggaaatgcctgggaga
gacccttcagataggaactacctttcatctgtcttgatacaggagattttccttacttgg
gatcatgacgatttatctctgcgggcaaatgcagctagaatattagtagtcctcttgtgc
aagcatgagtttgatgctcgataccaaaagcctgaagataagctatatattgcacagtta
tattttccactcattggacagatcctagatgaaatgcctgtcttttacaacctaaatgcc
gttgaaaagcgtgaagttttaattgttattttgcaaattgtgcgcaatcttgatgatgca
tcacttgtaaaagcgtggcaacaaagcatcgctcggactagattatttttcaaactcttg
gaggaatgcttagttctttttgagcatagaaaacctgctgatggcatgctcatgggctgt
agttctcgcagcccagttggggatgggcctgcttcccccaagtactctgatagactttct
cctgcagttaacaattatctatctgaggcatcaagacaagaagtcagacctcagggaaca
cctgaaaatggttatttatggcagagagtgaattcccaattaagctcccctagccagcca
tattccttgagagaagctctggctcaggcacagtcttctaggattggagcttctgcacaa
gcacttcgagaatctttgcacccgatattgagacaaaaattggagctttgggaagaaaac
ttgagtgcttctgtcaatctccaggttttggaaataacagagaaattttccatgatggct
gcctcccatagcatctctactgactatggaaaacttgattgtataacagccatattaatg
agcttcttttcccgaaatcaacctctgtctttctggaaagctttgtttcctgtcttcaac
aatgtctttgatcttcatggaggaactctaatggcaagggaaaatgatcgtttcttaaag
caagtgactttccatctacttcgacttgcagttttccgaaatgaaagcgtcaggaaaagg
gctgttattgggctccaattacttgtgaagagttccttctattgcttcatgcagacagca
aggttaagggtcatgctgattatcacattatcggagctgatgtctgatgtgcaagtgact
cagatgaagcctgacggaacgctagaggaaagtggtgaagcacgacggcttagaaaatct
ttggaggaaatgtcagatgaagctaaaagccccaacctattgagggagtgtggactttct
gatagtgctctggcaacaattccagaaagatcggaagagaacaggtggtcctggtcagag
gtgaaatatctctctgacagtcttcttcttgcccttgatggaagcttggagcatgcacta
ttgggatctgtgatgactatggatagatatgcagctgctgaaagtttctacaaacttgca
atggcatttgcacctgtcccagatcttcacataatgtggttgctacatttatgtgatgca
catcaggaaatgcagtcttgggctgaagctgcccagtgtgctgtggctgttgctggtgtt
gtgatgcaggcccttgtggctagaaacgatggtgtttggagcaaggatcatgtaactgct
cttcgtaaaatttgcccaatggtgagcaatgagatcacatcagaggcttctgctgctgag
gtagagggatatggtgcttcaaagctcacagttgactccgcagtgaagtaccttcagctt
gctaataagcttttctctcaagctgagctctatcacttctgtgccagcattctcgagctt
gtaattccagtttataaaagcaggagggcatatgggcagctggctaaatgtcacacatta
ctcactagtatctatgaatcaattcttgagcaggaatcaagcccaattccattcactgat
gctacatactatcgggtgggattctatggtgatagatttgggaagcttgatagaaaggag
tatgtataccgggagccccgtgatgttcggctaggtgacataatggagaaacttagtcat
atatatgagtctaggatggatggcaatcacactttacacattattccagattcgagacaa
gtgaaggcagatgaattacagcctggagtctgctacctgcagataactgctgttgatgca
gtaatggaggatgaagatttgggaagtagaagggaaaggatcttttcactttccactgga
agtgtccgtgcacgtgtgtttgaccgctttttgtttgataccccatttacgaaaaatggc
aagacccagggtggattggaagaccaatggaagaggcgaagtgtgctgcagactgagggc
tccttccctgcccttgtgaataggctcttggtaattaaatctgaatctcttgagttctcc
ccagtagaaaatgcaattggaatgattgaaactcggacagctgcactacgaaatgagctt
gaagagcctcgcagttctgaaggcgatcaactccctcgtctccagagtctacagagaatt
cttcaaggcagtgttgctgttcaagtgaacagtggagtcctgagtgtgtgtacggccttc
ctgtctggtgagcccgcaacgaggctgcgttcacaggaattgcagcaactcattgctgca
cttcttgaattcatggctgtttgcaagcgggccattcgggtacacttcagattgattgga
gaagaagaccaggaattccacacacagcttgtgaatggatttcagtccctcactgcagag
ttatctcattacatccctgccattctctcagagctttga
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