Quercus suber (cork oak): 112012854
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Entry
112012854 CDS
T05868
Name
(RefSeq) uncharacterized protein LOC112012854
KO
K12385
Niemann-Pick C1 protein
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
112012854
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
112012854
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
qsu02000
]
112012854
Transporters [BR:
qsu02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
112012854
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_N
Sterol-sensing
NPC1_MLD
Patched
Folate_rec
Motif
Other DBs
NCBI-GeneID:
112012854
NCBI-ProteinID:
XP_065637744
LinkDB
All DBs
Position
Unknown
AA seq
1216 aa
AA seq
DB search
MASSLGFLLAITLFQVILFTSLLSAEKLDTGVLSILEVKSGERHSEEYCAMYDICGERSD
GKVLNCPYGSPSVKPDELLSAKIQSLCPTISGNVCCTETQFDTLRAQVQQAIPFLVGCPA
CLRNFLNLFCELSCSPNQSLFINVTSIAELNGNMTVDGIDFYVTDTFGEELYNSCKEVKF
GTMNTRAIDFIGAGARNFKEWFAFIGQKAPPGFPGSPYAIGFKSIVPESSKMELMNVSTY
PCGDTSLGCSCGDCPLSPACSSSEPPSPPKKDSCSVRIGSLKATCVEISLVILYIVLVSA
FFGWGLFHQKRERRNRPSSMEPLLNVADNSEIDVVNLRKDGKLLSEVQDMVPQASNGVHI
SVVQGYMSSFYRRYGIWVARNPTLVLCSSVAIVLLLCLGLFRFQVETRPEKLWVGRGSKA
AEEKQFFDSHLAPFYRIEQLIIATMPDPKHGKSPSIVTEDNIQLLFEVQEKVDGISANYS
GSMVSLTDICLKPLGQDCATQSILQYYKMDPENYDTFGGVQHAEYCFQHYTTADTCMSAF
KAPLDPSTALGGFSGSNYSEASAFVVTYPVNNAIDEVGNENGKAVAWEKAFIQLAKEELL
PMIQSSNLTLSFSSESSIEEELKRESTADVITIIISYLVMFAYISVTLGDAPHLSSFYIS
SKVLLGLSGVLLVLLSVLGSVGFFSVIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAMKR
QSLELPLEERISNALVEVGPSITLASFSEILAFAVGSFIPMPACRVFSMFAALAVLLDFL
LQVTAFVALIVFDFLRAEDNRIDCFPCIKLPSSSVEPNEDSKLSKRVIAIRSSKINLLGP
GNDPNLGQQISLKNNESKTGRRPVIASKKINTIRTYNNCSLEASQNNTVSSAKRRLLKQI
CFFLQPQCCSPDEGPCGLGGACKDCTTCFRHSDLVSDRPNTEQFREKLPWFLNALPSADC
AKGGHGAYTNSVDLNGYESGIIRASEFRTYHTPLNKQGDFVNSLRAAREFSSRISSSLQM
NIFPYSVFYIFFEQYLDIWKIALINISIALGAIFIVCLVVTSSIWSSAIILLVLAMIVVD
LMGVMAILDIQLNAVSVVNLVMSIGIAVEFCVHIAHAFLLSQGDRNQRAKKALSTMGASV
FSGITLTKLVGVIVLFFSRSEIFVVYYFQMYLALVLIGFLHGLVFLPVALSMFGPPSSII
IEKGQEDEPSALSQTS
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctctttaggatttctacttgctattactttattccaggtgattttgtttact
tctttgctgagtgctgagaagctggatacgggtgttctttcgattttggaagtaaaatct
ggggaaagacattctgaagaatactgtgcaatgtatgatatatgtggagaacgcagtgat
gggaaagttttgaactgtccttatggctccccatctgtgaagcctgatgagttgctttct
gccaaaattcaaagcttgtgtccaacaataagtggaaatgtttgttgtacagagacccag
tttgacacactgcgggcacaagttcaacaagcaataccatttcttgtgggctgtccggcg
tgcttgaggaacttcttgaatcttttctgtgagctttcatgctctccaaatcagagtcta
ttcatcaatgttacttctattgctgagcttaatggcaacatgactgtggatggcattgac
ttctatgtaactgatacttttggtgaagagctttataactcttgcaaggaggtaaagttt
ggcacaatgaatacacgggccatagacttcattggtgctggtgctagaaattttaaagaa
tggtttgcatttattggccagaaagcaccccctggttttcctggttcaccttatgccatt
ggttttaagtcaatagttccggagtcatctaaaatggagctaatgaatgtgtctacatat
ccgtgtggtgacacttcactgggttgctcttgtggtgattgccctttatctcctgcgtgc
tccagttcagaacctccttctccacccaaaaaagattcctgctcagttagaattggatca
ctaaaggctacatgtgttgaaatttcactggtgatcctgtatattgttttagtttctgca
ttctttggatggggtttgtttcatcagaaaagagaaagaaggaatcgtccatctagcatg
gaaccattgctgaatgttgcagacaatagtgaaattgatgttgtcaacctgcgaaaagat
ggaaagcttctttcagaggtgcaagacatggttcctcaagcatcaaatggggttcatatt
tctgtggttcaagggtatatgtcaagcttttacaggagatatggaatttgggttgccaga
aatcccactcttgtgctctgttcctcagtggcaatcgttctcctgctttgtttaggtcta
tttcgtttccaggtggagacccgaccagagaagttatgggttggtcgtggtagtaaggca
gcagaagagaagcaatttttcgacagccaccttgctcccttctacagaattgaacagctt
ataatagcgaccatgcctgatccaaagcatggcaagtcacctagtattgttacggaggat
aatattcagttactctttgaagtacaggagaaggttgacggaatttctgccaactattca
ggctcaatggtatctttaactgacatttgcttgaagcctcttggccaggattgtgccact
caaagtattctgcagtattataaaatggatcccgaaaattatgacacctttggaggagta
cagcatgcagaatattgttttcagcattatactactgcagacacatgcatgagtgcattt
aaggctccacttgatccaagtactgccttaggaggattttctgggagcaattattcagag
gcttctgcatttgttgttacctaccctgttaataatgcaatcgatgaagtaggcaatgag
aatgggaaagcagtggcttgggaaaaagctttcatacagctagcaaaggaggagctgctc
ccgatgattcagtctagcaatcttactctttcattttcatccgaaagctcaatcgaggaa
gaactgaaaagagaaagtactgcagatgttataacaataataataagctatcttgtaatg
tttgcttacatatcagtgaccttgggagatgcacctcatttatcttccttctacatctca
tccaaggtgttgcttggtctttcaggcgttttgcttgttctgctttctgtccttggatct
gttgggtttttcagtgtgattggagttaaatccacgttaatcatcatggaagtcatccct
tttctagttttggctgttggagtagataacatgtgtatattggtacatgccatgaaacgg
caatccttggagttacctttagaagaacgaataagtaatgcactggttgaagttggtcca
tctataacactggccagtttttctgagattctggcttttgcagttggtagtttcattcct
atgccagcttgtcgtgtcttctccatgtttgcagctttggctgttctactagacttcctt
ctgcaagttactgcatttgttgcattgatagttttcgactttttgagagctgaggataac
aggattgactgtttcccatgcataaaacttccttcatcttctgttgaacctaatgaagat
tccaagctgagtaagagagtcattgccattagatcaagcaagatcaatcttctaggccct
ggaaatgatccaaatcttggccaacaaattagcttgaaaaataatgagagcaaaacagga
agaaggcctgtaatagcttcaaagaagatcaacaccatccgcacgtataataactgttcc
ctagaagcatcacaaaacaatacagtatcatcagcaaaaagaagattactaaagcagata
tgtttttttctccagccacagtgttgttctcctgatgaaggtccttgtggcttaggtgga
gcttgcaaagactgtacaacgtgcttccgccactcagatttggttagtgatcgtcctaat
acagagcaattcagggagaagcttccatggttcctcaatgctctgccatctgctgattgt
gcaaagggtggtcatggggcttacaccaatagtgtggatctgaatggttatgagagtggc
ataatacgagcatcagaatttcgtacctatcacaccccacttaacaaacaaggtgacttt
gtcaattcactgcgagctgcacgggagtttagctctagaatttctagttctctacagatg
aatatcttcccatactcggtgttctatatcttctttgagcaatatctggatatatggaag
atagctttgatcaacatttctatagcactcggtgcaatatttattgtttgtttggttgtt
acatccagcatttggagttctgcgattattttacttgttttggcaatgattgttgttgat
ctcatgggagtaatggcgattttagatatccaactaaatgcagtctctgttgtaaatctt
gtaatgtcgattgggattgctgttgagttttgtgtgcatatagcacatgccttcttgtta
agccaaggggataggaaccaacgagctaagaaggcgttgagtaccatgggcgcttctgtc
ttcagtggaattacacttacaaagctcgttggagtaattgtccttttcttctcaagatca
gaaatatttgtggtttattacttccaaatgtacctggcattggtccttattggtttcttg
catggacttgtatttttaccagtggcgttgagtatgtttggtccaccatcaagtataatc
attgagaaagggcaagaggatgaaccttctgctttatcacagacaagttga
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integrated database retrieval system
