Quercus suber (cork oak): 112012915 Help Entry 112012915         CDS       T05868                                  Name (RefSeq) pre-mRNA-processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism qsu  Quercus suber (cork oak) Pathway qsu03040   Spliceosome qsu04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:qsu00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     112012915   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     112012915  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:qsu03041]     112012915    04121 Ubiquitin system [BR:qsu04121]     112012915    03400 DNA repair and recombination proteins [BR:qsu03400]     112012915 Enzymes [BR:qsu01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      112012915 Spliceosome [BR:qsu03041]  Complex B   Other components    Prp19 complex     112012915  Complex C    Prp19-CDC5 complex     112012915 Ubiquitin system [BR:qsu04121]  Ubiquitin ligases (E3)   U-box type E3    112012915 DNA repair and recombination proteins [BR:qsu03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     112012915 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  WD40_Prp19 WD40 Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WD40_MABP1-WDR62_2nd EIF3I WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_HPS5 Beta-prop_WDR19_1st NBCH_WD40 Beta-prop_SPT8 U-box Beta-prop_EIPR1 PEP5_VPS11_N Beta-prop_DCAF4 zf-Nse WD40_like Beta-prop_DCAF12 PAS_11 PUMA_CC V_ATPase_I_N KNTC1_N Motif Other DBs NCBI-GeneID:  112012915 NCBI-ProteinID:  XP_023901054 LinkDB All DBs Position Unknown AA seq 522 aa AA seqDB search MNCSISGEVPEEPVVSTKSGLLYEKRLIERHISDYGKCPVTGEPLTMDDIVPIKTGKIVK PRPLQAASIPGMLGMFQNEWDSLMLANFALEQQLHTARQELSHALYQHDAACRVIARLKK ERDEARSLLAQADRQIPMSASMAANVPALSNGKRAAEDEEFGPGGKRIRPGISASIIGEL TDCNAALSQQRKKRQIPPTVATVDALERYTQISSHPLHKTSKPGVVSLDIHYDKDIIATG GLDTNAVLFDRPSGQILSTLSGHSKKVTSLKFVARGDLFLTGSADKTVRVWQESDNGNYN CRQILKDHTAEVQAITVHATNNYFVTASLDSTWCFYELSSGLCLTQVVDSTDSSGYTSAA FHPDGLILGTGTSEAIVKIWDVKSQANVARFDGHVGAVTSISFSENGYFLATAAHDGVKL WDLRKLRNFRTFSPYDSETPTNSVEFDNSGCYLALSGSDIRVYQVANVKSEWNCIKTFPD LSGTGKASCVKFGPDAKYLAVGSMDRNLRIFGLPSEDGPLES NT seq 1569 nt NT seq  +upstreamnt  +downstreamnt atgaactgctcaatttccggcgaagtgccggaggagccggtggtctccacgaaatccggg ctgctttatgagaagcgtttaatcgagagacacatctccgattatggaaaatgcccagtt acgggggaaccactaactatggatgacattgttccaatcaaaacaggcaagatagtgaag cccaggcctctacaggctgctagcatccctggcatgctcggaatgttccagaatgaatgg gacagtctgatgctggccaactttgcattggaacaacaactacatacagcaaggcaagag ctcagtcatgctctataccagcatgatgccgcttgccgtgtgattgcaagacttaagaaa gaaagagatgaagcaaggtcactacttgctcaggctgacaggcaaatacccatgtcagca tcaatggcggcaaatgttcctgcacttagcaacggaaagagagctgctgaggatgaggag tttggccctggtggaaagagaatacgtcctgggatatctgcaagtattatcggtgagctg actgactgtaatgcagctctatcacaacagcgcaaaaagcgacagatacctccaacagtg gctaccgttgatgctttggagaggtatactcagatttctagccatccacttcacaaaaca agcaaacctggtgttgtatctcttgatatccattatgacaaggatataattgcaactgga gggcttgacacaaatgctgtacttttcgatcgaccatctggacagatcttgtctacactc agtggtcattcaaaaaaggttacgagtctaaaatttgttgcacggggcgatttattcttg actggctctgcagacaagactgtacgtgtgtggcaagagtctgataatgggaactataac tgtaggcagatcttgaaggatcatactgctgaggtgcaagctattactgtacatgccaca aataactacttcgtgactgcttctcttgatagcacatggtgcttttatgagctttcttct ggactatgtctaacacaggttgtggactcaacagattctagtggatatacttctgcagca tttcatcctgatggtttaatccttgggacaggcacttcagaagctattgttaaaatttgg gatgtgaaaagtcaggcaaatgttgccagatttgatggacatgttggggcagtaacttcc atatcattctctgaaaatggatacttccttgcaactgcagctcatgatggtgttaagctg tgggatcttcgcaaattgaggaacttccgaactttctctccatatgattccgaaacccca acaaattctgtggagtttgataatagtggatgttaccttgcgctctctggctcagatata agagtttaccaagttgcgaatgttaaatcagaatggaattgtatcaaaactttccctgat ttgtctggcacaggtaaggcaagttgtgtaaaatttggtccagatgcaaaatatttagca gtaggatcaatggatagaaacctccgcattttcggcctgcctagtgaggatggtccgtta gaatcataa

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