Quercus suber (cork oak): 112013103
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Entry
112013103 CDS
T05868
Name
(RefSeq) autophagy-related protein 13b isoform X1
KO
K08331
autophagy-related protein 13
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
112013103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qsu04131
]
112013103
03029 Mitochondrial biogenesis [BR:
qsu03029
]
112013103
Membrane trafficking [BR:
qsu04131
]
Autophagy
Autophagosome formation proteins
ULK complex
112013103
Atg1 complex
112013103
Mitochondrial biogenesis [BR:
qsu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
112013103
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
112013103
NCBI-ProteinID:
XP_023901259
LinkDB
All DBs
Position
Unknown
AA seq
621 aa
AA seq
DB search
MPPSRGNHSHSDAARMEQIITEFYTKSLHIILESRTPYVSSRNFSGEQIMSMSLSSPSSS
SSSASASASASSSVRPRPRDKWFNLALRGYPGALENLDLWHHSNPEPMVVDVVLVQRPLD
WDPMPNFSPTREEIVIERWVLQYDHSRKVKDNHSSGSSSRRSSNITLHTLYKKSMLLLRS
LYLTVRLLPAYKVFRELNSSAQLRTFSLAYHVSSVIEPFPRSAEAEMQCFGFTPIDTSAG
RLCLSVLYRSSVLDLSSEPTPLTPQVIPDYVGSPLAEPLKRFPSLPVAGLGNHGSPSSLP
LPLPFSRRHSWGFDLYRASSPSVSFSPSPTHSESNVSISNPASRRFPPATLPPHPPGTSI
AHKNTTSFDEYCPSPTFSPSPSPSPPIYIPGTHLSHGLLRSESAPVNIPTTRLSSLPALS
NKQYLPPSPPIKSTRSGALRTDKFTGPTQTGAAVEQLFSLGKDDNRKYFGPKISSNDSPQ
ISFSRSSSRSLPDDFDDPEFDCPFDVDDDDMTDPGSRPGSFDQRGHISQDAAVGDLVRML
KKAPPLCPEFSNSVNVPQASGSEIWSSSIQEPCPTAQNAVSASVTSSGLVRLKTTADALE
ELQGYREMKKVLLKQGSKSYT
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgccaccctctcgtggtaatcattctcactctgatgctgcgagaatggaacaaataatc
acagaattctataccaaaagcctccacataatattggagtctagaaccccatatgtgtct
tctcgtaatttcagtggtgagcaaatcatgtcgatgtcgttgtcatccccatcctcttcc
tcgtcctctgcctcggcctcggcctcggcctcatcgagtgtgaggccgaggccgagggac
aagtggtttaatttggcacttaggggataccctggtgccttggagaatcttgatctctgg
caccacagcaatccagaacctatggtggttgatgtagtgttagttcaaaggcctcttgat
tgggacccaatgcccaatttttcgcccacaagggaagaaattgttatagagagatgggtg
ctgcagtatgatcatagtaggaaagtgaaggataatcatagttcagggagcagcagcagg
aggtctagtaacattactttgcataccttgtacaagaaatccatgttgcttctcaggtct
ttgtatctcactgttaggcttttacctgcttataaggtctttcgtgaacttaattcctct
gcccaactccgaacatttagtcttgcttatcacgtgtcttctgttattgaacccttccct
cgtagtgcagaggctgaaatgcagtgttttggtttcacccctattgatacttctgcaggt
aggctttgcctatcggtcttgtatcgttcatcagtcttggatttaagctctgaaccaact
cctcttaccccacaagttataccagattatgtaggcagcccattggcagagccgctcaaa
agatttccatccctacctgtcgcagggttggggaatcatggctctccgtcatcattgcca
ttgccattgccattttctaggcggcatagttggggttttgacctttatagagcttcttct
ccttcggtttctttctcaccttcacctacacattcggaatccaatgtttcaatttccaac
ccagcttcccgcagattcccacccgcaaccctgccacctcatccacctggaacatctata
gctcataagaatactaccagttttgatgagtactgtccatctcctacattttcaccctcc
ccttctccatcaccaccaatatatattcctggaactcatctttcacatggtcttttacga
tctgaaagtgccccagtaaacatacctactactaggctttctagtttgcctgcattgtcc
aacaagcaatatttgccaccgtctcctcccattaagagtacaaggtctggtgctttgagg
actgataaatttacaggtccaactcagactggtgccgcagttgagcagttgttctctctt
gggaaggatgacaacagaaaatattttggaccgaagatatcatccaatgactcaccgcag
atttcattttccagaagctcaagcaggtctttaccggatgattttgatgatcctgagttt
gattgtccttttgatgttgatgatgatgatatgacagatccaggtagcagaccaggttct
tttgatcagagaggacatatatcccaagatgctgctgttggtgatcttgtacgcatgttg
aagaaagctccacctctctgcccagaattttccaattcagtaaatgtgccacaagcctct
gggtctgaaatatggagtagcagcatccaggaaccctgtcctactgcgcagaatgcagtt
tctgcaagcgtcacgtcatctgggcttgttaggttgaagacaacagctgatgcattggaa
gagctccagggttatagagagatgaagaaagtgttgcttaagcaaggcagtaaatcatac
acataa
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