Quercus suber (cork oak): 112013233
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Entry
112013233 CDS
T05868
Name
(RefSeq) vacuolar protein sorting-associated protein 35B
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112013233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qsu04131
]
112013233
Membrane trafficking [BR:
qsu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
112013233
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
112013233
NCBI-ProteinID:
XP_023901387
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MMINGIEDEDKWLAEGIAAIQHNAFYMHRALDANNLREALKYSAQMLSELRTSKLSPHKY
YELYMRAFDELRKLEMFFKDESRHGVSIVDLYELVQHAGNILPRMYLLCTVGSVYIKSKE
APAKDVLKDLVEMCRGVQHPIRGLFLRSYLAQISRDKLPDVGSEYEGDADSVMDSVEFVL
QNFTEMNKLWVRLQHQGPGRVREKLEKERSELRDLVGKNLHVLGQIEGVDLGMYKDAVLP
RVLEQIVNCSDDLAQYYLMDCIIQVFPDEYHLQTLETLLGACPQLQPTVDVKTVLSQLME
RLSNYAASSTDVLPEFLQVEAFAKLSSAIGRVIEAQVNMPIVGAITLYVSLLTFTLRVHP
DRLDYVDQVLGACVKKLSGKPKLEDQRAKKQVVALLSAPLEKYNDAVMALTLSNYPRVMD
HLDNETNKVMAMVIIESIMKNYTCISTAHQVEVLFELIKGLIKDLDGTAADELDEEDFNE
EQNSVARLIHMLYNDDPEELLKIICTVKKSIMNGGPRRLPFTVPPLIFSALRLIRQLQGQ
DGDVAGEAVPATPKKIFQILNEMIESLSAVPSPELELRLYLQCAEAANDCGLEPVAYEFF
TQAFVLYEEEIADSKAQVTAIHLITGTLQRFNVFGVENRDTLTHKATGYSAKLLKKPDQC
RAVYACSHLFWVDDQDGIKDGERVLLCLKRALRIANAAQQMANVTRGNSGPVTLFVEILN
KYLYFFEKGNPQITSAAIQGLIELITTEMQSESTAPNAASDAFFASTLRYIQFQKQKGGA
MGEKYDSVKV
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgatgataaacggaattgaggacgaagataaatggctggccgaagggattgccgccatt
caacacaacgccttctacatgcaccgcgctctcgacgccaataatctccgagaagcccta
aagtactcggctcagatgctatcggagcttcgaacttcgaaactctcacctcacaaatac
tacgaactctacatgcgagcgttcgatgaattgaggaagctggagatgttcttcaaagac
gaaagcaggcacggggtttcgattgtggatctctatgaacttgttcagcacgctggcaac
attttgcctagaatgtatctcctatgtacagtaggatctgtgtacatcaaatctaaggag
gctcctgctaaggatgtccttaaagatctcgtggaaatgtgtcgtggtgttcaacatcca
atccgtgggctctttttaagaagttatcttgctcaaatcagtagagataaattacctgac
gttggttcagaatatgaaggagatgctgactctgtcatggattctgtagaatttgtgctc
cagaatttcactgagatgaataagctttgggtacgactgcagcatcagggacctggtcgg
gtgagagagaagctggaaaaggaaaggagcgagctccgtgatctggttgggaaaaatctc
catgtgctcggtcaaatagagggcgtggaccttggaatgtacaaagatgcagttcttccc
agagtcttagagcagattgtcaactgcagtgatgaccttgctcaatattatctgatggat
tgcataattcaggtctttcctgatgagtaccatttacagacccttgagacattattgggt
gcttgcccccagcttcagccaacagttgacgtcaagacagtgttatctcaattaatggag
agattatcaaattatgctgcttcaagtacagatgtgttaccggaatttctgcaagtggaa
gcttttgcaaaattgagcagtgctattgggagggtgatagaagcacaggtcaacatgcct
attgttggagccataactttatatgtctctcttcttacatttactctccgtgttcatcct
gatcgacttgattatgtggatcaagtactgggagcatgtgttaagaagctctctggcaaa
ccaaaacttgaagaccaaagagcaaaaaaacaagtcgttgcgcttctaagtgctccactg
gagaaatacaatgatgctgtcatggccctgacactttctaattacccccgtgtgatggat
caccttgataatgaaacaaataaagtcatggcaatggttattattgaaagcatcatgaag
aattacacttgcatctctactgctcatcaggttgaggtgttgttcgaattaattaaaggg
ctcatcaaggacttggatggaactgctgcggatgagcttgatgaggaggattttaacgaa
gaacaaaattctgttgctcggctcattcacatgctttataatgatgacccagaggaattg
ttaaagatcatatgtactgtgaagaagagtataatgaatggaggaccaagacgcctgcct
tttactgttcctcctcttatattttctgcactcaggttgataaggcaattacaaggtcag
gatggggacgtagcgggagaggcagtgcctgcaactccaaagaaaatttttcagatatta
aatgagatgatcgaatctctttctgctgttccatctcctgaactggaattaaggttgtac
ctgcaatgtgctgaggctgctaatgactgtggtcttgagcctgttgcttatgaatttttc
actcaggcatttgtattatatgaagaagaaattgcggactccaaagcccaggtgactgca
atacatctgataactggaacccttcagaggtttaatgtatttggtgttgagaatagagat
actctaacacacaaggccacagggtattcagcaaagcttctaaagaaacctgatcagtgc
agagcagtttatgcatgttcacatcttttttgggttgatgatcaggatggaattaaggat
ggagaaagggtcctgctttgcttaaagcgtgccttgaggattgcaaatgctgctcaacag
atggccaatgttacacggggtaacagtgggccagtcacactctttgttgaaatactgaac
aagtacctttatttttttgagaagggaaacccccaaattacaagtgctgcaatccagggt
ctaatagaattaatcacaactgagatgcaaagcgaatctacagcccccaatgctgcttca
gatgctttctttgctagcacgctgcgttacatccagtttcagaaacagaaaggcggtgca
atgggtgaaaaatatgattctgtcaaggtttaa
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