KEGG   Quercus suber (cork oak): 112013273
Entry
112013273         CDS       T05868                                 
Name
(RefSeq) uncharacterized protein LOC112013273
  KO
K11097  small nuclear ribonucleoprotein E
Organism
qsu  Quercus suber (cork oak)
Pathway
qsu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:qsu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112013273
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:qsu03019]
    112013273
   03041 Spliceosome [BR:qsu03041]
    112013273
   03032 DNA replication proteins [BR:qsu03032]
    112013273
Messenger RNA biogenesis [BR:qsu03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     112013273
Spliceosome [BR:qsu03041]
 Complex A
  U1 snRNP components
   Sm proteins
    112013273
  U2 snRNP components
    112013273
 Complex B
  U1 snRNP components
    112013273
  U4/U6.U5 tri-snRNP components
    112013273
 Complex C
  U2 snRNP components
    112013273
DNA replication proteins [BR:qsu03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     112013273
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 112013273
NCBI-ProteinID: XP_065629206
LinkDB
Position
Unknown
AA seq 99 aa
SRQPLTLPHSLTVSSPLSLTLLGLTKLIFRFLQSKARIQIWLFEQRDLRIEGRIIGFDEY
MNLVLDDAEEVNVKKKSRKSLGRILLKGDNITLMMNSGK
NT seq 300 nt   +upstreamnt  +downstreamnt
tcacgtcagcccctcactctccctcactcactcaccgtctcctctccactctcgctcact
ctactcggtctcacaaaactgattttcaggtttcttcagagtaaagctcgcattcagata
tggctttttgagcagcgagacctgaggatcgagggccgtatcatcggctttgatgagtac
atgaatttggtgctggatgatgctgaagaagtcaatgttaagaagaagagcagaaaatct
ttagggaggattcttcttaagggagacaacataactctgatgatgaactctggaaagtga

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