Quercus suber (cork oak): 112013399
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Entry
112013399 CDS
T05868
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112013399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsu03019
]
112013399
03036 Chromosome and associated proteins [BR:
qsu03036
]
112013399
Messenger RNA biogenesis [BR:
qsu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112013399
Chromosome and associated proteins [BR:
qsu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
112013399
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
112013399
NCBI-ProteinID:
XP_023901558
LinkDB
All DBs
Position
Unknown
AA seq
1072 aa
AA seq
DB search
MASPSLIPVSGVSSEHHGTRKNMSFSNSCGMDVDVGMSSEVVSQYKKRRISQNTDFLSCE
VSRDIEAMLPTLRSADYYMKPCLKELATRELMDPGYCSRVLDFTIGRVGYGSVKYLGETD
IRQLELDEIVKFCRHEVVAYEDENTKPLVGQGLNKAAEVTLVLQVRSLDLEKGKLKMIVD
KLRMSVERQGARFISFDPAGGEWKFSVQHFSRFGLSDDEEEDIVMDDATVVQNPVGKNGD
EIYDLDDETQVDTTGVLLSHSLPAHLGLDPVRMREMKMLMFPDEEEEAEDFDDEIPTRKK
PSFGKEYIKPPLHSSAQRMSNRSSPPVARKTPLALLEYKHGSSDSNPPGAILMAQQNKGL
SLKPMKPEGSGFKLDLKRETPVTGSHSCNIVDAGLFMGRSFRVGWGPNGVLVHTGVPVAS
NNSQRVLSSVINLEKVAIDKVVRDENNKVREELVDLAFDSPLNLHKEINHVTEEVEVGSF
KLRLLKLVSDRIMLSEICRSYGDIVERRLEVPGLSSSTRVVLSHQVMIWELIKVLFSDRE
SSAQLKSLGADNEEDMMQDIKEASSEVDPEALPLIRRAEFSLWLQESVCPRVQDTISSVN
ESNYLEHIFILLTGRQLDAAVELAASRGDVRLACLLSQAGGSMVNRADVAQQLDLWKINR
LDFSFIEKDRLRLYELLAGNIHGALHGGKVDWKRFLGLLMWYQLPPDTSLPIVLHTYQHL
VDIGKATYPVPVYIDEGPVEEAVKWSTKERFDFSYYLMLLHASEEGEFSFLKAMFSALSS
THDPLDYHMIWHQRAVLEAIGAITTNDLHVLDMGLVSQLLCVGKCHWAIYVILHMPYRED
FPYLHANLIREILFQYCESWSSEESQRQFIENLGVPAAWLHEAMAVYFNFYGDFSKALEH
FLQCAHWQKAHSIFILSVAHKLFLSAKHSEIWRLATSMEDHKSEIENWDLGAGIYISFYL
LRSSFEEDNVSMSELDSIESKNAACRDFLGRLNESLAVLGGKLQVDARIAYSKMAEEVCG
LLLSDIGEGSTCDDQLSCFDTSFSAPIPEDLRSSYLQGAVSVFTCFLSEVAT
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggcatctccttctctaatcccggtttccggggtttctagtgaacatcatggtacgaga
aaaaacatgtcatttagtaattcctgtggcatggacgttgatgtgggaatgagttcagaa
gttgtatctcagtacaagaaaagaaggatatctcaaaacactgattttttgtcatgtgag
gtttctagagatattgaagctatgttacctactttgaggtcggctgattattatatgaag
ccctgcttgaaggagttggctactcgggagcttatggaccccggttattgtagccgagtt
ctggatttcacaattgggagggttggttatggatcggtcaaatatcttggggagactgat
atacgacagttagaattagatgaaattgtgaagttctgtaggcatgaggtagttgcgtat
gaagatgaaaataccaagcctttggttggacaggggcttaacaaggctgctgaggtgact
ttggtgcttcaagtaagatcactggatttggagaaggggaaactaaagatgattgtggat
aagttaagaatgagtgtggagagacaaggggctcgcttcatttcgtttgacccagcaggt
ggtgaatggaaattctcagttcaacatttcagcagatttggattgagtgacgatgaagaa
gaagatattgtaatggatgatgctactgtagttcaaaatcctgttgggaagaatggtgat
gagatttatgatcttgatgatgaaacccaggtagacaccactggtgttctgctttctcac
tctcttcctgctcatcttgggcttgatcctgtaaggatgagagaaatgaaaatgttgatg
tttcctgatgaggaagaggaggcagaggattttgatgatgaaatacctacacgtaagaag
ccatcctttggtaaagaatacataaaacctcctttacacagttctgctcagaggatgagc
aataggtctagtcctccagttgctcgaaaaaccccgttagcattgctcgagtacaaacat
ggtagttctgactcaaaccctcctggggccattctgatggcccaacaaaataagggtctc
tcactgaagccaatgaaacctgaaggttcaggttttaagctggacctcaagcgagaaaca
ccagtaactggaagccattcttgcaacatagttgatgcaggattgttcatgggtaggtca
tttcgagttgggtggggcccaaatggggtccttgttcacactggtgtaccagtagccagt
aacaattctcagagggtgttatcctctgtaatcaatttagagaaggttgctatagataaa
gttgttagagatgaaaataataaagtcagagaggaacttgttgacttggcttttgattct
ccattaaatctccacaaggagataaatcatgtaacagaagaagttgaagttgggtccttc
aagctgaggcttctaaaacttgtctcagatcgcatcatgctttcagagatttgcaggagt
tatggagatattgttgagaggaggttggaggttcctgggctatcttcctctacccgtgta
gttttgtctcaccaagtaatgatatgggaattgataaaagttcttttttctgatagggaa
agtagtgcacaattgaagtccttgggtgctgacaatgaggaagacatgatgcaggatata
aaggaagcttcttcagaagttgacccagaagcactccctcttattcgaagagcagagttc
agcttatggttgcaagaaagtgtttgtcctcgtgtacaagatacaataagctcagtgaat
gaatcaaattatttagaacatatattcatactcttgactgggcggcagcttgatgcagct
gtggagctggctgcttctagaggagatgtgagattggcttgtttattaagtcaggctggt
gggtccatggtgaatcgtgctgatgttgcacagcagcttgatctttggaaaatcaatagg
ctggatttcagtttcattgagaaggaccggttaaggctttatgaattgctcgctggtaat
attcatggtgctttgcatggcgggaaagttgactggaagaggtttctaggtttattgatg
tggtatcaactaccacctgacacttccttgcccattgttttacacacttatcaacatctt
gttgatattggaaaggctacatatcctgtcccggtatacattgatgaaggaccggtagaa
gaggctgttaaatggagtacaaaagaacgttttgacttctcgtattatcttatgctgctt
catgccagtgaagagggagagtttagcttcttaaaggcaatgttcagtgccttatcttca
acacatgatcctcttgattaccatatgatctggcatcagcgtgcagtgttggaagcaatt
ggtgctatcactactaatgatcttcatgttcttgacatgggacttgtctcgcagctgttg
tgtgtggggaaatgccactgggccatctatgtgattcttcatatgccctaccgtgaagat
ttcccatatttgcatgctaatcttattcgggaaatcttgttccagtactgtgaatcatgg
agttcagaagaatcgcaacgccagttcattgagaacttgggtgtaccagctgcgtggctt
catgaggctatggcagtttacttcaacttctatggggacttctccaaggcccttgaacat
tttcttcaatgtgcacattggcaaaaagctcattctattttcatattgtcggttgctcat
aaattgttcttgtcagccaaacactcggagatatggaggcttgctacatctatggaggac
cacaagtcagaaattgaaaattgggacttgggagctggaatttatatttcattctatcta
ttgagaagttcatttgaggaagataatgtttccatgagtgaactggattctattgagagc
aaaaatgctgcttgtagagactttcttggtcggttaaatgagtctttggcagttttgggt
ggcaaattacaagttgatgcaagaatagcttattcaaaaatggcagaggaagtttgtggt
ttgcttctttctgacattggagaaggctcaacatgtgatgatcagttaagctgctttgac
acttctttcagtgctcctattcctgaggacctacgctcaagttatttgcagggtgcagta
tctgtttttacatgctttctttcagaggtggctacatag
DBGET
integrated database retrieval system
