Quercus suber (cork oak): 112013877
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Entry
112013877 CDS
T05868
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu00040
Pentose and glucuronate interconversions
qsu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112013877
Enzymes [BR:
qsu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
112013877
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
112013877
NCBI-ProteinID:
XP_023902022
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All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MASSSSLSLITILFSFLIPSLIASTPAHDPELVVQEVQRSINASMTRRKLGYFSCSTGNP
IDDCWRCDSNWEKNRQRLADCAIGFGKNAVGGRDGKIYVVTDSSDDDAVNPKPGTLRYAV
IQDEPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINI
HDCKQGGNAMVRDSPNHYGWRTISDGDGVSIFGGTHVWVDHVSLSNCADGLIDAIHGSSM
ITISNNFMTHHDKVMLLGHSDSYTQDKGMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNND
YTHWEMYAIGGSASPTINSQGNRFLAPDDRNSKEVTKHEDAPQSDWKGWNWRSEGDLLLN
GAFFTPSGAGASSSYAKASSLGAKPSSLVATLTANAGTLSCRKGSKC
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcaagctcttcttctctctctctcatcaccattctcttctctttcttaatcccaagc
ctcattgcctcaaccccagctcatgacccagagcttgtagtacaagaagtacaaaggagc
atcaatgcatctatgactaggagaaagttggggtatttctcatgctcaactggtaaccca
attgatgattgttggaggtgtgattccaattgggaaaagaataggcagaggctggctgat
tgtgcaattgggtttggcaagaatgctgttggtggaagagatggaaagatttatgtggtc
acagattctagtgatgatgatgccgtaaatccgaagccagggactctaagatatgctgtg
atccaagatgaaccattgtggattatttttgcacgtgatatggtgatcaaattgaaagag
gaattgatcatgaactcgtttaagacaattgatggcaggggcgctagtgtgcacattgct
ggtggtccatgcattactattcagtatgtgactaacattataatccatgggataaacata
catgattgtaagcaaggagggaatgctatggtgagagattccccaaatcactatgggtgg
aggaccatatcagatggtgatggtgtatccatctttggtggtacccatgtctgggtggac
catgtctcattgtcaaactgtgctgatggtttgattgatgcaattcatgggtcttccatg
attaccatttcaaacaatttcatgacacaccatgataaggttatgttattgggacatagt
gattcctacactcaagacaagggcatgcaggtcactattgccttcaatcactttggagaa
gggcttgttcaaagaatgccaaggtgtaggcatgggtacttccatgtggtgaacaatgac
tacacacattgggaaatgtatgccattggtgggagtgcttccccaaccatcaatagccaa
gggaatagatttcttgcaccagatgatagaaacagcaaagaggtgaccaaacatgaggat
gcaccacaaagtgattggaagggctggaattggagatctgaaggagacctattgctaaat
ggtgcatttttcacaccatctggagctggggcttcctcaagctatgctaaggcttcgagc
ttaggtgccaaaccatcttctcttgttgctactcttaccgctaatgctggtacacttagt
tgccggaagggttctaaatgctga
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