Quercus suber (cork oak): 112013881
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Entry
112013881 CDS
T05868
Name
(RefSeq) LOW QUALITY PROTEIN: probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu00040
Pentose and glucuronate interconversions
qsu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112013881
Enzymes [BR:
qsu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
112013881
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
112013881
NCBI-ProteinID:
XP_065636321
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All DBs
Position
Unknown
AA seq
409 aa
AA seq
DB search
MASYSLLSLITILFSLLIPSLIASRPVKDPEFVVKEVQRSINASLTRRNLKGDSSCSTGN
PIDDCWKCDSNWDKNRQKLAECAAGFGKNAAGGKDGQIYVVTDPSDNDAVNPKNGTLRHA
VIQDEPLWIIFDRDMVIKLKVELIMNSYKTIDGRGANVHITGGGCITIQYITNIIIHGIN
IHECKPAGNTNVRSSPXHFGHRGVSDGDAINVFGSKHIWVDHVTLSNCDDXLVDVIKASS
LVTISNNLFTQHDKAILLGHSDDYTADKSMKVTIAFNHFGEGLTQRLPRIRHGYVHVVNN
DYTKWKMYAIGGSASPTILSQGNRFLAPDDEKSKEVTKYENAPESEWKKWNWKSEGDRFL
NGAFFRSSSGSNSSSNVASASDISAKESSLVPKLTANAGALKCKKGSAC
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggcaagctacagcttgctctctctcattaccattctcttctctctcttaatcccaagc
ttaattgcctccagaccagttaaagacccggaatttgtagtaaaagaagtacaaaggagc
atcaatgcctctttgacgaggagaaatttgaagggagattcctcttgctcaactgggaac
ccaattgatgattgttggaagtgtgactccaattgggataagaatcggcagaagctagct
gaatgtgcagctgggtttggcaagaatgctgctggtggaaaagatggtcagatttatgtg
gttacagatcccagtgataatgatgctgtaaatcccaagaacgggactctaagacatgct
gtgatccaagatgaaccattgtggattatatttgaccgtgatatggtgatcaaattgaag
gtggaattgattatgaactcgtataagaccattgatggtaggggagctaatgtgcacata
actggtggtggatgcattactattcagtatataactaacatcataattcatgggataaac
atacatgaatgtaagccagcagggaatactaatgtgagaagttccccgngtcactttggg
cataggggtgtttcagatggtgatgctataaacgtctttggtagtaaacatatttgggtg
gaccatgtcacactttcgaactgtgatgacngtctagttgatgttattaaagcttcatcc
ttggttaccatttcaaacaatttatttacacaacatgataaggctattttattaggacac
agcgatgactacactgcagacaagagcatgaaagtcactattgccttcaatcactttgga
gaagggcttactcaaagacttccaaggattaggcacgggtacgtccatgtggtgaacaat
gactacaccaagtggaaaatgtatgccattggtggcagtgcttcccctaccatccttagc
caagggaacagatttcttgcaccagatgatgaaaaaagcaaagaggtgaccaaatacgaa
aatgcaccagaaagtgaatggaagaaatggaattggaaatctgaaggagatcgatttcta
aatggtgcatttttcagatcctcctctggatctaattcttcctcaaatgttgcaagcgct
tccgacataagtgcaaaagaatcttctcttgttcccaaacttacagctaatgcgggtgca
cttaaatgcaagaagggttctgcatgctga
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