Quercus suber (cork oak): 112013884
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Entry
112013884 CDS
T05868
Name
(RefSeq) LOW QUALITY PROTEIN: autophagy-related protein 16
KO
K17890
autophagy-related protein 16-1
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
112013884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qsu04131
]
112013884
03029 Mitochondrial biogenesis [BR:
qsu03029
]
112013884
Membrane trafficking [BR:
qsu04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
112013884
Others
Specific organelles associated proteins
Auto phagosome
112013884
Mitochondrial biogenesis [BR:
qsu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
112013884
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
ATG16
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_NWD2_C
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
WDR54
NBCH_WD40
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_EIPR1
eIF2A
Beta-prop_Nup120_160
Beta-prop_RIG_1st
WD40_RFWD3
Cytochrom_D1
Beta-prop_Vps41
DUF7165
Fez1
ecTbetaR2
INO80E
DUF948
Motif
Other DBs
NCBI-GeneID:
112013884
NCBI-ProteinID:
XP_065629086
LinkDB
All DBs
Position
Unknown
AA seq
478 aa
AA seq
DB search
MEEFDPWCVFVKGSEWKEKAENLELELQQCYKAQSRLSEQLVVEVAESRASKASLQEKEE
GITNLQTELTQTRDECSQLQADLEEKIKALELLVRENHQLKAELEEMTNKAKNAEAENKM
LVDRWMLQKMQDAERLNEANAIYEEMVDRLKASGLEKLAQQQVDGVVRRNEDGAEFFMES
TIPSICKHRINAHEGGCASILFEYNSGKLVSGGQDRTIKMWDTNTGSLSHTLYGSLGSVL
DLTITHDNRSVIAASSSNNLYVWDVSSGRVRHTLTGHTDKVCAVDVSKVSSRHVLSAAYD
RTIKVWDLNKGYCINTIICHSNCNALSFSMDGQTICSGHVDGNLRLWNIQTGKLLSEVAA
HSLAVTSISLSRNGNVVLTSGRDNLHNLFDMRSLEVCGTLRASGNRVASNWSRSCISPDD
NYVAAGSADGSISIWSISKTDIVSTLREHTSPVLCCSWSGLGKPLASADRNGIICTWT
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatttgatccttggtgcgtgtttgttaagggttcagaatggaaagagaaagca
gaaaatttggagttggaacttcagcaatgttacaaagctcaatctcgattgtctgagcaa
cttgtggtggaggttgctgagtccagagcttcaaaagcatcgcttcaagagaaagaagaa
ggaatcactaatctgcagacagagttgacccaaacaagggacgaatgctctcaattacag
gcagacctagaagaaaaaattaaagctttagaattgcttgtgagggagaaccatcaactt
aaagcagaactggaagagatgactaataaagctaagaatgctgaggctgaaaataagatg
ttagttgatcgctggatgctgcagaagatgcaggatgcggaacgactcaatgaggcaaat
gcaatttatgaagaaatggttgatcggctcaaggctagtggtttagaaaaacttgctcaa
caacaagtagatggtgtggtccgtcgaaatgaagatggtgctgaattttttatggagtca
accattccctctatatgcaagcacaggatcaatgcccatgaaggtggctgtgcttccata
ttgtttgagtacaattctggcaagttggtcagtggagggcaggacaggacaatcaagatg
tgggatacaaacacgggatcactaagccatactctctatggttctcttggctctgttctt
gatcttaccattacccatgacaatagatctgtcatagcagcaagcagttcgaacaacttg
tatgtatgggatgtcagctcaggtcgggtccgccatactctcactggccatactgataaa
gtttgtgctgtagatgtaagcaaagtttcgagtcgtcatgttttgagtgcagcttatgat
cgtaccataaaagtttgggacttgaataaaggttactgcattaacactatcatttgtcac
agcaattgcaatgctcttagcttcagcatggatggacaaaccatttgttctggtcacgtt
gatgggaatcttcgattatggaatattcagacaggaaagctacttagtgaagttgctgca
cattcacttgctgtaacatctatatctctgtctcggaacggaaatgtagtattgactagt
ggaagggacaacttgcataatttgtttgatatgcgatctctggaagtgtgtggcacgctt
agagcgtctggaaatagagtggcgtctaattggagccggtcctgtatcagtccagatgac
aactatgttgctgctggatccgctgatggttctatctccatttggtctatatctaaaact
gatatagtgagcactctgagggaacacacttctccggtgctgtgttgttcttggagtggg
cttgggaaacctttagcctcggcagacaggaatggaattatatgtacctggacatga
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integrated database retrieval system
