Quercus suber (cork oak): 112014003
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Entry
112014003 CDS
T05868
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112014003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsu03019
]
112014003
03009 Ribosome biogenesis [BR:
qsu03009
]
112014003
04131 Membrane trafficking [BR:
qsu04131
]
112014003
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
qsu04147
]
112014003
Messenger RNA biogenesis [BR:
qsu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
112014003
Ribosome biogenesis [BR:
qsu03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
112014003
Membrane trafficking [BR:
qsu04131
]
SNARE
SNARE associated proteins
Others
112014003
Autophagy
Aggrephagy
Other aggrephagy associated proteins
112014003
Exosome [BR:
qsu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112014003
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
AAA_5
CDC48_2
TIP49
AAA_22
AAA_14
AAA_33
RNA_helicase
Parvo_NS1
NPHP3_N
AAA_28
nSTAND3
Mg_chelatase
AAA_17
ATPase_2
IstB_IS21
AAA_18
AAA_7
ABC_tran
AAA_lid_PRS2_C
AAA_24
NB-ARC
DUF815
TsaE
Sigma54_activat
NACHT
ResIII
Vps4_C
Viral_helicase1
SLFN-g3_helicase
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
112014003
NCBI-ProteinID:
XP_065621813
LinkDB
All DBs
Position
Unknown
AA seq
802 aa
AA seq
DB search
MADQASTSMHSLKRKRDAEPNTNKKAPNRLVVDESKNHDDNSVVLLHPDTMNTLNFFHGD
AVLIKGKKRRDTVCVVLGDEACDKSKVFMNKVVRSNLRVRLGDVVSLHQCNDVKYGNKVH
VLPLDDTIEGLTGSLFDAYLKPYFMDTYRPVRKGDLFVVRGGMRSVEFKVMETEPGEYCI
VAPDTEVYCEGEALKREDEERLDEIGYDDIGGVRKQLAQIRELVELPLRHPQLFKTIGVK
PPKGILLYGPPGTGKTLIAKAIANETGAFFFCINGPEIMSKMAGESESNLRKAFAEAEKN
APSIIFIDEIDSIAPKRDKTGGEIERRIVSQLLTLMDGVNSREHVIVIGATNRPNSIDPA
LRRFGRFDKEIDIGVPDEVGRLEVLQIHTKKMKLSEDVNLERVAKETHGHVGADLAALCT
EAALQCIREKMDVIDMEDETIDAEVLNSMAVTNDHFSGALGTSTASALRETIVEVPNVSW
KDIGGLESVKRELQETVQYPVEHPEKFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQ
ANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQRGNGIGDAGGA
ADRVLNQLLTEMDGLSSKKTIFVIGATNRPDIIDPALLRPGRLDQLIYIPLPDESSRLQI
FKACLRKSPVSKDVDLTALAKLTGGFSGADITEICQRACKYAIREDIQKDIEREKREIDA
MEEESANEVAEIKAAHFEESLKFARRSVSDADILKYRAFAQNLQQSRGFGSDFKFSEAGR
TPNDSNLFASSADGIEDADLYD
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggccgatcaagcatcaacatccatgcattccctcaaaagaaaaagggacgccgagccc
aacaccaacaagaaagctcccaataggttggtcgtggacgaatccaagaaccacgacgac
aactctgtcgtcttactacaccctgatacgatgaacactctcaacttctttcatggtgat
gctgtcttgatcaagggtaagaagagacgggacacggtttgcgttgttctcggggacgag
gcttgtgacaagtccaaggttttcatgaacaaggtggtgcggtctaacctcagagtcagg
cttggtgatgtggtctcgttgcatcaatgcaatgatgttaagtatggtaacaaagttcat
gttcttcctcttgatgataccattgaaggtcttactgggagtctttttgatgcgtatttg
aagccttactttatggacacgtataggcctgtgaggaaaggtgatctttttgttgtgaga
ggtggaatgaggagtgtagagtttaaggtcatggagactgagcctggagagtattgcatt
gttgcacctgacaccgaagtttactgtgaaggagaggcgttgaagagagaagatgaggaa
agattggatgagataggttatgatgatattggcggagttaggaagcaacttgctcagatt
cgtgagttggtggaattgcctttaaggcatccacaacttttcaagactattggagtgaag
cctccaaagggaattctgctatatggacctcctggcactggcaagacacttattgcaaag
gctattgctaatgaaactggggctttctttttctgtattaatgggcccgagattatgagc
aagatggctggtgagagtgagagtaatttgaggaaagcttttgctgaagcagagaagaat
gctccttcgattatatttattgatgagattgactctattgctcccaagcgtgataagacc
ggtggagagatagagaggaggattgtttcacagcttttgacattaatggatggtgtgaat
tctcgggaacatgtcattgttattggagctaccaataggcctaatagtattgacccagca
ttaagaaggtttgggaggtttgataaagagattgatattggtgttccggatgaagttggg
cgtcttgaggttcttcagatccataccaagaagatgaagctctctgaagatgtgaatttg
gaaagagtggccaaggaaactcatggacatgtgggtgcggatcttgcagctctttgtact
gaagctgcactacaatgtattagagaaaaaatggatgtgattgacatggaagatgaaacc
atcgacgctgaggttctcaactccatggctgtcaccaatgatcactttagtggtgctctt
ggaactagcactgcctctgctttgcgtgaaactattgtggaagtgcccaatgttagttgg
aaagacattggtggacttgagagtgtcaagagggagcttcaagagaccgttcaatatcca
gtggagcatcctgagaagtttgagaagtttggaatgtcaccatctagaggagttctcttc
tatggtccccctggttgtgggaaaacccttttggccaaggctattgctaatgaatgtcag
gctaattttattagcatcaagggtcctgaattactcacaatgtggtttggagagagtgag
gccaatgttagggatgtttttgacaaggctcgtcagtctgcaccttgtgtcctgtttttc
gatgaacttgactccattgctattcagagaggaaatggaattggagatgcaggtggtgct
gctgatagagttttgaaccagctcttaactgaaatggatgggttatcatccaagaaaact
atctttgtcattggagctactaataggcctgatataatcgacccagcacttctaagacct
ggtcgtcttgatcaattgatctatattcctcttccagatgagagttcacggcttcagatt
ttcaaagcttgtcttagaaaatcacctgtgtcaaaagatgttgaccttacagctcttgcc
aagcttactggcggctttagtggtgctgatatcacagaaatatgccagagggcttgcaaa
tatgccattagagaggacattcagaaggatattgagagggaaaagagggaaattgacgct
atggaagaggaatcagcgaatgaagtggctgagattaaggcagctcactttgaggagtcc
ttgaagtttgccaggaggagtgtgagtgatgctgacatcctcaagtatcgagcttttgct
caaaatttgcagcaatcaaggggttttgggtcagattttaagttttcagaggcaggaaga
acacccaatgattcaaatctatttgcatcttcagctgatgggattgaggatgccgactta
tatgattag
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integrated database retrieval system
