Quercus suber (cork oak): 112014941
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Entry
112014941 CDS
T05868
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar sorting protein 18
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu04142
Lysosome biogenesis
qsu04145
Phagocytosis
qsu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
112014941
04142 Lysosome biogenesis
112014941
04148 Efferocytosis
112014941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
qsu04131
]
112014941
Membrane trafficking [BR:
qsu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
112014941
Hops complex
112014941
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-RING_11
zf-RING_Vps41
zf_RING_Vps8
Nup54_57_C
zf_RING_Vps8_fungal
RPN1_RPN2_N
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-RING_2
Beta-prop_VPS8
TPR_IFT121
Motif
Other DBs
NCBI-GeneID:
112014941
NCBI-ProteinID:
XP_065631624
LinkDB
All DBs
Position
Unknown
AA seq
988 aa
AA seq
DB search
MDPAGRQVFTVDLLERYAAKGRGVITCMAAGNDVILLGTSKGWVIRHDFGLGDSTEIDLS
TGRPGEQSIHRVFIDPGGSHCIASVVGSGGVDTFYTHAKWIKPRVLTKLKGLVVNAVAWN
RQLITEASTKEVILGTDNGQLHEIAVDEKDKREKYIKFLFQLEELPEAFMDLQMETASIM
NGTRYYVMAVTPTRLYSFTGIGSLETVFASYLDRVVHFMELPGEIPNSELHFYFKQRRAV
HFAWLSGAGIYHGGLNFGAHHGSPNGDENFVENKALLDYSKLSEGAEAVKPSSMAVSEFH
FLLLIGNKVKVCIHLTSXLFFELQFDLTSESVSRGIIGLCSDATAGLFYAYDQNSVYQVS
VNDEGRDMWKVYLDMNEYAGALANCRDPLQRDQVYLVQAEAAFASKDYHRAASFFAKINY
MLSFEEITLKFITIGEQDASRTFLLRKLDNLAKDDKCQITMISTWATELYLDKINRLLLE
DDTAVVNHGSEYQSVIKEFRAFLGDCKDVLDEATTMRLLESYGRVEELVYFASLKEQYEI
VVHHYIQQGEAKKALEVLQKPAVPIDLQYKFAPDLIMLDAYETVESWMATNNLNPRKLIP
AMMRYSSEPHAKNETHEVIKYLEYCVHRLHNEDPGVHNLLLSLYAKQEDDSALLRFLQCK
FGKGRENGPEFFYDPKYALRLCLKEKRMRACVHIYSMMSMHEEAVALALQVDPELAMAEA
DKVEDDEDLRKKLWLMVAKHVIEQEKGAKRENIRKAIAFLKETDGLLKIEDILPFFPDFA
LIDDFKEAICSSLEDYNKQIELLKQEMNDATHGADNIRNDISALAQRYAVIEREEECGAC
RRKILTVGREYQMARGYTSIGPMAPFYVFPCGHAFHAQCLIAHVTRCTNEAQAEYILDLQ
KQLTLIGGEARKDSNGSLTEESITSVTPVDKLRSQLDDAIASECPFCGDLMIREISLNFI
LPEEALQVASWEIKPSSLGSQRTLSLPL
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggatccggcaggaagacaggtattcacggtggaccttctagaaagatacgccgcgaag
ggacgcggagttataacttgcatggccgccggcaacgacgtcattttgttgggcaccagt
aaaggttgggtcatccgccacgatttcggcctcggcgactccaccgagattgatctgtct
acgggtcgtcccggcgagcaatcgatccacagggtgtttattgatccaggagggagtcat
tgcattgccagtgtagttggaagtggaggtgttgatactttttatactcatgccaagtgg
attaagcctcgagttttaaccaaattgaaaggtcttgttgtcaatgctgttgcctggaac
agacaactcattactgaagcttcgacaaaggaagttattcttggtacggataatggccaa
cttcatgagattgcggtcgatgagaaggacaagagggagaagtatattaagtttctgttc
caattggaggaacttcccgaagctttcatggatttacagatggagacagctagcataatg
aatggaactagatactatgtaatggctgttactcctacacgactttactcttttactggg
attggatccttggagactgtttttgcaagttatttagatcgtgtcgtgcatttcatggag
cttcccggtgaaataccaaacagtgaactgcatttctacttcaagcaacgaagagctgtg
cattttgcctggctttcaggagctggtatctatcatggtggcctaaactttggagcacat
catggctctccaaatggagatgaaaattttgtggagaacaaggctctattggactattca
aaattgtccgaaggtgctgaagcagttaaaccgagttctatggcagtgtctgaatttcat
ttcttgcttcttattgggaataaggtcaaggtgtgtattcacttaactagttgacttttt
tttgaacttcagtttgacctaacatcagaatcagtttccaggggtatcattggattatgt
agtgatgccactgctggactgttctatgcatatgaccaaaactctgtttatcaagtgtct
gtcaatgatgaaggccgagatatgtggaaggtttatctggacatgaatgagtatgctgga
gctttggcaaattgtcgtgacccactccaaagagaccaagtatacttagtacaggctgaa
gctgcatttgcctccaaggattatcacagagcagcatctttctttgcaaaaattaactat
atgttgtcatttgaggagatcactctaaagtttattaccataggtgaacaggatgcctcg
agaactttcttactccggaagcttgataatcttgcaaaggatgataaatgccaaataaca
atgatctccacttgggctactgaattgtacttggacaagataaatcggctgctcttggaa
gatgacactgctgtggttaatcatggttcagagtaccaatcagttattaaagagttccgt
gcatttcttggtgattgcaaggacgtattagatgaagcaactacaatgagacttctggaa
agttatggtcgggttgaagaactagtatattttgctagtctaaaggagcagtatgaaatt
gttgttcaccactatattcagcaaggagaagcaaagaaagcacttgaagtacttcaaaaa
cctgctgttcctatagaccttcagtataagttcgccccagacctcatcatgcttgatgca
tatgaaactgtggagtcgtggatggccacaaacaacctgaacccgcggaaactgattcca
gcaatgatgcgttattcaagtgaacctcatgcaaagaatgaaacacatgaggtcatcaaa
tatttggaatactgtgttcatcgtttgcataatgaggatcctggagttcacaacttgctt
ctctccttgtatgccaagcaggaagatgatagtgcacttttgcgtttcctacaatgcaag
tttgggaaaggaagggaaaatggccctgaattcttctatgatcccaagtatgccttgcgc
ctatgcctcaaggaaaagcgaatgcgtgcctgtgttcatatatacagcatgatgtctatg
catgaagaagcagttgctcttgccctacaggttgatcctgagcttgcaatggctgaagct
gacaaggttgaagatgatgaagacttaagaaagaagctttggcttatggttgccaagcat
gttattgaacaggaaaagggggctaaacgggagaacatacggaaggcaatagcatttctg
aaggaaacagatggccttctaaagattgaggatatattaccattctttccagactttgct
ctgattgatgacttcaaagaggcaatttgctcatcgctagaggattacaacaagcaaatt
gaactactgaaacaggagatgaatgatgcaacacatggtgcagacaacatcagaaatgat
atcagtgcacttgctcaaagatatgctgtgattgagcgtgaagaggaatgtggggcttgt
aggcgtaaaatcttaaccgtgggtagagagtaccagatggctcggggttacacatccatc
ggaccaatggcccctttctatgtctttccatgtggacatgccttccatgcacaatgcctg
attgctcacgtgacacgttgtaccaatgaagctcaggcagagtatatactggatctgcag
aagcaacttactttaattgggggtgaagcaaggaaggattcaaatggtagcctaactgag
gaatccataaccagcgtgaccccggtagataagctccgatcacagttggacgatgccata
gccagtgaatgcccattttgcggtgacctgatgatccgtgagatatctttgaattttatc
ctcccggaggaagcacttcaggttgcttcatgggagataaaaccaagtagtcttggaagc
caaaggactctttccttacctttatga
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