Quercus suber (cork oak): 112015216
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Entry
112015216 CDS
T05868
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112015216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qsu03041
]
112015216
Spliceosome [BR:
qsu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
112015216
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
112015216
NCBI-ProteinID:
XP_065635844
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MATLADSFLADLDELSDNEADLIEEDEVGAGNMEEDVDGDMADIETLNYDDLDSVSKLQK
TQRYIDIMQKVEDALQNGSDMTNHGMVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRD
KYRLKFPELESLVHHPIDYARVVKKIANEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKP
LPEEILSKTIDACDRALALDAAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL
VSLAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQTTPPSLRMRACRILASK
STLAARVDSTRGDPSGKTGRGLREEICKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSVGQSKLAA
KAAKRFKEKNYGSSGASSGLTSSLAFTPVQGIELSNPQAHAHQLGSGIQSTYFSETGTFS
KIKRT
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcttgctgattctttccttgcagaccttgatgaactatctgacaatgaagcc
gatcttattgaggaagatgaagttggtgctggaaatatggaagaagatgttgatggggac
atggcggacatagaaactcttaactatgatgacctggatagtgtttcaaaattgcagaaa
acacagagatatattgatattatgcagaaagtggaggatgcactccagaatggttctgat
atgacaaatcatggaatggttttggaagatgatcctgagtaccagctgattgtggactgt
aatgctttgtcggttgacattgagaatgaaattgttattatccacaattttatacgtgac
aagtaccggttgaaatttccagagcttgaatcacttgtgcatcacccaattgattatgct
cgtgttgttaagaagattgcgaatgaaatggatttgacccttgttgatttggaaggtctt
ttaccctcagctatcattatggtagtgtcagttacagcatcaactacaagtggcaagcca
cttcccgaggaaattcttagtaagaccattgatgcatgtgatcgagctcttgctcttgat
gcagcaaagaaaaaggtccttgactttgtagaaagtagaatgggttatattgccccaaat
ctttctgctattgttggtagtgctgttgcggcgaaactaatggggacagcaggtggtctt
gtatcattagctaagatgcctgcttgtaatgttcagcttcttggtgcaaagaaaaagaac
cttgctgggttttcaactgcaacatcacaatttcgtgtgggttatattgagcaaacagag
atattccaaactacacctccttctttgaggatgcgtgcatgtcggatcttggcttcaaag
tcaacacttgcagcaagagtagattccaccagaggagatccatcagggaaaactggtaga
gggttacgggaagagatctgtaagaaaattgagaagtggcaagagcctcctcctgcgaag
caacctaagccacttccagtgcctgattctgagcctaaaaagaagagaggtggtcgtcgg
ctaaggaagatgaaggaaagatatgcgataacagacatgaggaagctggctaataggatg
caatttggtgttcctgaagagagttctttaggtgatggactgggggagggttatggaatg
cttggtcaggctgggagtggcaagctgcgggtatcagttggtcagagcaaacttgctgcc
aaagctgctaagaggtttaaggaaaagaattatggaagcagtggtgcctcctcaggattg
acttcaagtttagcatttacacctgtgcagggcatagagctcagtaacccgcaggctcat
gcccaccagcttggcagtggaattcaaagcacatacttctctgagacaggaacattttca
aagatcaagcggacctga
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