Quercus suber (cork oak): 112015819
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Entry
112015819 CDS
T05868
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu00040
Pentose and glucuronate interconversions
qsu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112015819
Enzymes [BR:
qsu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
112015819
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Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
112015819
NCBI-ProteinID:
XP_023904027
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All DBs
Position
Unknown
AA seq
331 aa
AA seq
DB search
MASLPYADVDSSLRALAGRAEGFGRFAIGGLDGHIYCVTTLADDGPGSLREGCRKKEPLW
IVFEVSGTLHLSSYLNVSSYKTIDGRGQRIKLTGKGLRLKECEHIIICNLEFEGGRGHDV
DGIQIKPNSKHIWIDRCSLRDYDDGLIDITRQSTDITISRCYFTQHDKTMLIGADPTHVG
DRCIRVTIHHCFFDGTRQRHPRVRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA
GQKKKSFEYYTEKAADREEVKSGSIRSEGDLFLNGAQAFLSTVGNEECVFHPSEFYLTWT
MEAPSDSLKDILQICTGWQSIPRPVEQMVIG
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccctaccttacgctgacgtggattcgagtctcagagctctggcgggtcgggcc
gaggggttcggtcggttcgcgatcggaggcctcgacggtcacatctattgcgtcaccact
ctcgcagatgatggtccaggatcccttcgtgaaggttgccgtaaaaaagagccactatgg
atagtttttgaagtttctggtactcttcatctttcttcttacttgaacgtgtcgtcttat
aagacaattgatggccggggtcaaaggataaagctcaccggcaagggcttaaggctgaag
gaatgtgaacacataatcatatgcaaccttgagtttgaaggtggtagaggacatgatgtt
gatggtattcaaataaaaccaaattcaaagcacatatggatagaccgctgcagcctccgt
gattatgatgatggacttatagatatcactagacaaagcacagatataactatttctaga
tgttactttacacagcatgacaagacaatgcttattggggcagaccccactcacgttggt
gatagatgcattcgggtaacaattcatcattgtttctttgacgggactcggcaaaggcac
cctcgtgttagatttggaaaagttcatctatacaacaattacaccagaaactggggtata
tatgctgtttgtgccagtgtagaatctcagatatactctcaatgcaacatatatgaagca
ggacagaagaaaaagtcttttgaatattatacagagaaggcagcagatcgggaagaggta
aaatctggctcaataagatctgaaggagacttgttcctgaatggggctcaagctttctta
tcaacagtgggcaacgaagaatgtgtgttccatccaagtgaattctacctgacatggaca
atggaagcaccctcagattctcttaaagatattctccaaatttgtacaggttggcaatcc
attcccaggccagtggagcagatggtaattggatag
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