Quercus suber (cork oak): 112015883
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Entry
112015883 CDS
T05868
Name
(RefSeq) putative pectate lyase 21
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu00040
Pentose and glucuronate interconversions
qsu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112015883
Enzymes [BR:
qsu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
112015883
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Paralog
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
112015883
NCBI-ProteinID:
XP_023904098
LinkDB
All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
MSAFFLFYLVMLLYATLPSSARTLMQISEATEWSSTRRQLGTGSCRTGNPIDDCWRCDPD
WETNRKMLADCAVGFGRNAIGGRDGEFYVVKDSDNDDPDNPVPGTLRHAVVQEEPLWIIF
DHDMVITLKEELIMSSYKTIDGRGFNIQISDGPCITIQNASNIIIHNIYVHDCIPAWKAM
GQVAPQHSDEKSDGDGISIFGARDVWIDHCTLSNCYDGLIDVVYGSTSITISNSYMFDHN
EVMLMGHNDDFLDDKNMQVTIAFNFFGAGLVQRMPRCRHGYFHIVNNFYAGWEMYAIGGS
ANPTINSQGNVFIANDDNSTKEVTKRENSESGEWQNWNWRSDEDVMLNGAYFTPSGQETA
ASYIRATSMVARPASHLINTPPSAGVLDCQIGIQCYIPKR
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctttctttctcttctatttagttatgctcttatatgccacccttccatcctct
gcacgtacattgatgcagatatcagaagcaactgaatggagctcgactagaaggcagttg
ggaacaggatcatgcagaactggaaaccctattgatgactgctggagatgtgaccctgac
tgggaaaccaaccgcaagatgctagctgattgtgcagtagggttcggacgcaatgctatt
ggaggaagagatggtgaattctatgttgtcaaagattcagacaatgatgaccctgataac
ccagttccaggcactctccggcacgctgtagtgcaagaagaacctctctggatcattttc
gatcatgacatggtcatcactttaaaggaagagcttatcatgagctcatacaagaccatt
gatggtagaggatttaacatacaaatatcagatggaccatgcataactattcaaaatgcg
agtaacatcatcatacataacatctacgtacatgactgcataccagcatggaaagccatg
gggcaggtagcaccacagcattctgatgaaaaatcagatggagatggtatatccatattt
ggggctagggatgtgtggattgatcactgcacactatcaaattgctatgatggacttatt
gatgtggtatacggatcaacatctataacaatctcaaacagctacatgtttgatcataat
gaagtcatgctcatgggtcataatgatgacttccttgatgacaagaatatgcaagttacc
attgcctttaacttctttggggcgggactggttcaaagaatgccaaggtgtaggcatgga
tattttcacattgtaaacaatttctatgctggatgggagatgtatgcaatcggtggaagt
gccaatcccacaattaatagccaaggaaatgtctttattgcaaatgatgacaactccaca
aaagaggtgactaaacgtgaaaactcagaatctggggagtggcagaattggaattggagg
tcagatgaagatgtgatgctgaatggtgcttactttacaccttctggacaagaaactgct
gcaagttacataagagcaacaagcatggttgcaagaccagcttcacatctaataaatacc
cctccatctgctggagttcttgattgtcaaataggcatccaatgctatattccaaagcga
tga
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