Quercus suber (cork oak): 112015903
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Entry
112015903 CDS
T05868
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu00040
Pentose and glucuronate interconversions
qsu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112015903
Enzymes [BR:
qsu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
112015903
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
112015903
NCBI-ProteinID:
XP_023904130
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MGIPLILLVLLALLAPTCISSSIIQDPELVVQEVHKNINASRRDLGYFSCGSGNPIDDCW
RCDPNWEKNRQRLADCAIGFGKHATGGRDGKIYVVTDPGDDNPVNPKIGTLRHAVIQNEP
LWIIFKHDMVIKLKEELLVNSYKTIDGRGANVHIAGGPCITIQFVSNIIIHGLNIHDCKQ
GGNAYVRDSPDHYGWRTMSDGDGVSIFGGSHIWVDHCSLSNCHDGLIDAIHGSTAITISN
NYMTHHNKVMLLGHSDSYTQDKFMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYSHWE
MYAIGGSAAPTINSQGNRFLAPNDSYNKEVTKHEDAPQSEWKKWNWRSEGDLMGNGAFFT
PSGAGASSSYAKASSLSARPSSLVSTITAGAGILKCKKGSRC
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgggaatcccacttattcttttggtacttttggctcttctagctccaacctgcatatcc
tcttcaataatccaagaccctgaactagtagtacaagaagtacacaagaacatcaatgcc
tctaggagggatttaggctatttctcttgtggttctgggaatccaattgatgattgctgg
aggtgtgatccgaattgggaaaagaaccggcaacgcctagccgattgtgcaattgggttt
ggtaagcatgccactggaggcagagatggtaaaatatatgtggtcacagaccctggtgat
gataatccagtgaaccccaagataggcactcttagacatgctgtgattcaaaatgaacca
ctatggatcattttcaaacatgacatggtgatcaagctaaaggaagagcttctcgtgaat
tcatataagacaattgatggtcgtggtgcaaatgtgcacattgctggcggtccatgcatt
actatacaatttgtgtccaacattattatccacggcctaaatatacatgactgcaagcaa
ggtgggaatgcttatgtgagggactcgcctgatcattatggatggaggactatgtcggac
ggtgatggggtttcgatttttggaggaagtcacatttgggtggatcattgttctttatct
aattgtcatgatgggctaattgatgccattcatggatccacagccatcaccatctctaac
aattacatgacccaccataacaaagtcatgctcttgggtcatagtgactcatacacacaa
gacaaattcatgcaagtcactatagctttcaatcattttggagaagggcttgtgcagagg
atgccaagatgtagacatggctatttccatgttgtgaacaatgactactctcattgggaa
atgtatgcaattggtggcagtgcagctcctactattaatagccaagggaatagattcctt
gctcccaatgacagttataacaaggaggttactaaacatgaagatgcaccacaaagcgag
tggaagaaatggaattggaggtccgaaggagatttgatggggaatggtgctttcttcacg
ccttctggggccggagcgtcttctagctacgccaaggcatctagcttgagtgcaagacca
tcttctcttgtgagtactatcacagccggagctggtatacttaagtgcaagaagggctcg
cgttgttga
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integrated database retrieval system