Quercus suber (cork oak): 112017087
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Entry
112017087 CDS
T05868
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 5
KO
K14811
ATP-dependent RNA helicase DBP3 [EC:
5.6.2.7
]
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
qsu03009
]
112017087
Enzymes [BR:
qsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112017087
Ribosome biogenesis [BR:
qsu03009
]
Eukaryotic type
Pre-60S particles
Helicases
112017087
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ERCC3_RAD25_C
ResIII
UTP25
CMS1
ISPD_C
DUF1764
Motif
Other DBs
NCBI-GeneID:
112017087
NCBI-ProteinID:
XP_023905318
LinkDB
All DBs
Position
Unknown
AA seq
526 aa
AA seq
DB search
MGRKLEDSTTTGVLPGDSEPPQNPENKIKKKKKNKNKPRNKDKAEEPEANNPKRKHEEIE
PKEKKKPKEDEKESKTHQGKEEDEAVKDGLVVVSGQNVKLGKYAPLKSFAESGLPQEVLE
CCNNFQSPSSIQSRAWPFLLDARDFIGIAATGSGKTLAFGVPAIMHVLNKGKGKMSTGRN
PLCLVLSPTRELAQQISDVLCDAGKSCSVESVCLYGGTSKGPQIASLKSGVDIVIGTPGR
LKDLIEMGVCCLKDVSFVVLDEADRMLDMGFEQEVRSILGQTCSARQMVMFSATWPPLVH
QLAQEFMDPNPVKVVVGSEDLAANHDVMQIVEVLDDRSRDQRLVTLLEKYHQSQRNRVLV
FVLYKYETKRVENMLLERGWNVVSIHGDKAQHERTKALSLFKKGSCPLMIATDVAARGLD
IPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVAHTFFMQQNKGLAGELVNVLREAGQI
VPEALLKFGTHVKKKESKLYGAHFKEISLDAPKAKKITFDDSDDDD
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgggtcggaaactcgaggactccaccaccaccggcgttcttcctggcgattcagaaccc
ccacaaaacccagaaaataagataaagaagaagaagaagaataagaataagccaaggaac
aaggacaaagccgaagaacctgaagctaataatcccaagcgaaagcacgaagaaatcgag
cccaaagagaagaagaaaccgaaagaggatgagaaggaaagcaaaacccaccaaggaaaa
gaagaggatgaagctgtgaaagatggtctggttgtggtgagtgggcaaaatgtgaaattg
ggtaagtatgctcctttgaagtccttcgcggagtcgggtctgccccaagaggttttggag
tgctgcaacaacttccagagcccctcttccattcagtcccgtgcctggcctttcttattg
gacgctcgtgactttatcggcattgccgccaccggctcaggtaagacactggcatttggg
gtgccggcaattatgcatgtgttgaacaaaggaaaaggaaagatgtcgacggggcgtaat
ccgctttgccttgtgctttcaccaactagggagctagctcaacaaatttcagatgttctg
tgtgatgctgggaaatcttgtagtgtggaatcagtttgtctatatggaggaacctcaaaa
ggacctcagatagcttctttgaagtctggtgttgatattgtcattggaacacctggtcgt
ttaaaggatctgattgaaatgggagtgtgctgccttaaggatgtgtcatttgtggttctt
gatgaagccgatcgaatgctggatatgggatttgagcaagaagttcgctctattctgggt
cagacctgttctgctcgccaaatggtaatgttcagtgccacgtggcctcccttagttcat
caattagctcaggagttcatggaccctaatccagttaaggttgttgtaggttcagaggat
ttagctgccaaccatgatgtaatgcagatagtagaggttttggatgatcgttcacgtgat
cagcgtttagtcactctgctggaaaaataccaccaatcccagaggaatagagtattggtt
tttgtcttgtacaaatatgaaacaaaacgtgttgaaaatatgctgttagaaaggggttgg
aatgttgtttcaatacatggtgacaaagcacaacatgaacgtacaaaggcattgtcatta
ttcaagaaaggaagctgccctttgatgatagctactgacgtagctgctcgaggattggat
attccagatgttgaagtggtgatcaactatagttttcctctgaccacagaggactatgtc
cacagaattgggcggactggacgggctggtaaaaagggtgttgctcatacattcttcatg
cagcagaacaaggggcttgctggcgagctggtaaatgtcctcagagaagctgggcaaatt
gtgcctgaggcccttttaaaatttggcactcatgtaaagaagaaggagtccaagctttat
ggggctcacttcaaggaaatttctctagatgctccaaaggccaaaaagattacatttgat
gactctgacgatgatgactga
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