Quercus suber (cork oak): 112017415
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Entry
112017415 CDS
T05868
Name
(RefSeq) uncharacterized protein LOC112017415 isoform X3
KO
K14416
elongation factor 1 alpha-like protein
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112017415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsu03019
]
112017415
Messenger RNA biogenesis [BR:
qsu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
112017415
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
Zn_ribbon_RanBP
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
112017415
NCBI-ProteinID:
XP_023905632
LinkDB
All DBs
Position
Unknown
AA seq
695 aa
AA seq
DB search
MPRKVNYGVDYDEEVDDYEGYDYDYDYDYDDDVEDNGKAPQLEQETSKRGLWRCSVCTYD
NDEGLFACDICGVLNPSKTGANIDKQTANFNDMKSSRVSSGIIGKNGLLNIKSNAERSDV
SSSLMPKGKQDSFDDNNCSKNKAHNVQSSLKISDGSFATMPKGRHHNVDEGSCSKNDMAN
ILSSDKSSHSSPALKLKGRHEITGDSSSSLISGGKPQSLNSSLNKMALGEGSGFSNNVNA
RGTRSQSEYKPEKWMLNDQAEDTLIQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKEMHK
YEKEAKLQGKGSFAYAWALDESAEERERGITMTVAVAYFDSKKYHVVVLDSPGHKDFVPN
MISGATQADAAILVIDASIGAFEAGMDSAKGQTREHAQLIRSFGVDQIIVAINKMDVVDY
SKERFDLIKQQLGTFLRSCGFRDPSITWIPLSAMENQNLVVASSDVRLLSWYHGPYLLDA
IDSLQPPTRDLSKPLLMPICDVIKLPSLGQVSACGKVEAGALRSGSKVLVMPSGAVGSVR
SLERDSQACTSARAGDNVAVSLQGIDAGNVMAGGVLCHPDFPVAVAKRLELKVLVLDITT
PILIGSQLEFHIHHAKEAGRVAKILSLLDPKTGKVTKKTPRCLTAKQSAVVEVALQGPVC
VDEFSNCKALGRVFLRALGRTIAVGIVTRIIESQA
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtaaagtaaactatggagttgattatgatgaagaagttgatgactatgaaggt
tatgattatgattatgattatgattatgatgacgacgtagaagacaatgggaaagcacct
cagttagagcaagaaacttctaagcgtggcctttggcgttgctctgtatgcacttatgat
aatgatgagggtttgtttgcttgtgatatttgtggggtgctaaatccttcaaaaactggc
gccaatattgataagcaaacagcaaactttaatgacatgaaatcttcaagagtttcctca
ggcatcattgggaagaatggtctacttaatataaaatcaaatgctgaaaggtcagacgtg
tcatcatcattgatgccgaaaggcaaacaagatagttttgatgacaacaattgttcaaag
aacaaggctcacaatgtacagtcaagtctaaaaatttcggatggctcatttgcaactatg
ccaaaaggcagacatcataatgtggacgagggcagttgttcaaagaatgatatggccaac
atactatcaagtgataaaagctctcatagctctcctgcattgaaactgaaaggcagacat
gaaattacaggtgatagcagtagttctttgattagtgggggcaagccacaaagccttaac
agtagtttgaacaaaatggctcttggtgagggatctggattttcgaataatgttaacgct
agagggactcgttctcaatcagagtataaacctgaaaagtggatgctcaatgaccaagct
gaagatacattgattcaactgaatcttgcaatcgtaggtcatgttgattctggaaaatca
acactctctggtagacttctacaccttttggggcgaatatcccaaaaagagatgcacaaa
tatgaaaaggaggcaaagctacagggcaaggggtcctttgcttatgcttgggcattggat
gagagcgctgaagaaagggaaaggggaataaccatgacggttgctgttgcttattttgat
tccaaaaaatatcatgttgttgtgcttgactcaccaggccataaggattttgttccaaac
atgatatctggggcaacacaagctgatgctgcaattcttgtgatagatgcctcaatcggt
gcatttgaagctggtatggacagtgccaagggacaaacacgggaacatgcacaacttatc
agaagttttggtgttgatcaaattatagttgcaattaacaaaatggatgttgtggattac
tcaaaggaacggtttgatttaattaaacagcaacttggaacatttctccgttcttgtggt
tttagagatccttctataacgtggatcccattgagtgccatggaaaatcaaaatttggtg
gttgcttcttctgatgttcgtctgttgtcctggtatcacggaccttatctgttggatgca
attgattccctccaacctcccacaagagacttgtcaaagcctctgcttatgcctatatgt
gatgttattaaattgccttcactagggcaggtgtctgcctgtggtaaagtagaagctgga
gcccttcggagtggatccaaggttctagttatgccatcaggggctgtggggtcagtacgt
tccttagaacgtgactctcaggcttgtacttctgcaagagctggagacaatgtggctgtt
agtctgcaaggcattgatgcagggaatgtgatggccgggggtgtgctatgtcacccagat
tttcctgttgccgtcgcaaaacgtttggaactgaaggtccttgtcttggatattacaacc
ccaattttaattggttcacagttggaatttcatatacatcatgcaaaggaagctggaaga
gtggccaaaatattgtctttgcttgatcctaagactggcaaggtgacaaagaagacaccg
cgctgtcttactgcaaagcagagtgcagttgttgaggtggctttgcagggaccagtgtgt
gtggatgagttttcaaattgtaaagctcttgggagggtgtttttaagagcattaggaaga
actattgctgttgggattgtaacccgcataattgagtctcaggcgtag
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