Quercus suber (cork oak): 112017475
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Entry
112017475 CDS
T05868
Name
(RefSeq) protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsu03019
]
112017475
Messenger RNA biogenesis [BR:
qsu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112017475
Surveillance factors
Other surveillance factors
112017475
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
112017475
NCBI-ProteinID:
XP_023905695
LinkDB
All DBs
Position
Unknown
AA seq
1644 aa
AA seq
DB search
MAEGKLDLPDDLLSSKPSDHSWSAKVEASGGNDEDKVLMGLLDESKDQSASESSIPLSPQ
WLYAKPTEPKMETRGPTSVSLGNPTDPNQKDNWRLDGSEDKKDWRRTAADSEISRRWREE
ERETGLLGGRRDRRKAERRVDNVSMRETVESRALPTSDRWHDGRNSGHETRRDSKWSSRW
GPEDKDKESRTEKRTDLEKEDAHNDNQSFVGSNRSVSERDSDSRDKWRPRHRMEVHSGGS
NAYRAAPGFGLERGRVEGSNMGFTLGRGRSNVVGRGSSTGSIGAADKSESVPGRPSHSVD
SFCYPRGKLLDIYRRQKLDPSFTIMPDDMEELAPITEVGFIEPLAFVAPDAEQEAILGDI
RRGKLTSSGMVYSLYRKGRSTENVTGVEDLDYTEQNQGILLPTSNDEAADTSQEAATDDA
YQADDDGTLWKYSSKRNAVDEKYIKEAKVNVIGAINGLEDGLAPIISESNGVCGATEIDG
AQHSASQMNIGEKWQMADSDFAKHVQFDGIEFSTSFDLRSKLPDDSNSLFVVPSPEQNQS
RNSQANDLDRVAPPEELSLYYVDPQGVTQGPFVGADIILWFEQGFFGTDLPVRLADAPEG
TPFQELGKVLPYLKVKDGYDNSTEPNSKLEQCGAFEEQLDTSLPASASLMEINSSSVNDL
CPTSTEFNSLSAQHVQSRVSEPEVSLQLPHSEGQSFHKLITQDEEIVFPGRPADKGYSIA
KSSGSSRHSTDNPISHPSLPNELTEPGVSIQNDNKLHPFGLLWSELEGHTKHAKSSAPST
MGRAAPFGAMGDPALAAETWSDVYRKNAHVDPNLYQDAMAARHLSLMEQESNHFDLAEQL
MAQQFQQQQQQQLQQRSMLSPHAHINESVLEHVPTQNLLHQQLANRSAPDLDHLLTLQLQ
QQRQIQFQQQHQLHQQQQFHQQQKLLQEQKLLQEQKILQEQKLLQEQKLLQEQQQSQVRQ
VLLEQLFRSQMHDPGLGQSHVDPLRANHQAVLEQLLLQEMQQRSHHPSRHNEPSLEQIMQ
AKFGHMPQQDHQRDLYELISRAQHGHQSLEQQLLQQDQLQARQLSMGLRQRTNIEGERHI
GSMWPADESDQFLRTHAGPHRTHSSGFGPMDVYQRQQRPSHEEQLNQLERNLSFQERLRQ
GLYDPSSLPFERSVSMPAGAPGMNLDVLAMARAHGLDMQESSARMQSAGQVGTFSSGIHP
HNPHHPLIPNQFHGPQLDAIEGRWPENNEQLENDWMESRVQQLHINPERQKRESEVKMTS
RDPTLWMSEGFNDEKSKQLLMELLHQKSGHQSTEPLEVGKETRAPSGLYSGLSSSDHPFT
LRLDREAGLDNTFAVGSYGSSSCEPLQDERATSLESNEIMPFRSDSGSLVEGELRLAGIN
ETGQAIYTNSNMISKSNMSNEFSEAEGRKHGSRSEGVMKGPAFEIQEGLVEQAGLAALDR
GEILINALSRQSSIGSAGGKTGFYSDKIGNSFVEEVSKVSKERVPVPLKGQDNNILLRRP
PVPHPSSSQEGLSELVSDQVARGKISSSGASDGGRREPGVNLLSQGSDIMASGKKDMRFR
RTSSFGDADVSEASFIDMLKSNAKKSAPAETHSTTGFSETTDGAQGGRGGKKKGKKGRQI
DPALLGFKVTSNRIMMGEIQRIED
NT seq
4935 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggcaagctcgatctgccagacgatctcctctcatctaagccgtccgatcac
tcctggtccgccaaagtggaagcttcgggtgggaatgatgaggataaggtgcttatgggg
ttacttgatgagtcaaaagatcaatcagcgtcagaaagcagcatacctctatctccccag
tggctttatgccaaaccgactgagcctaagatggaaacacgtgggccaacttcagtgtct
cttggtaaccctaccgatcccaatcaaaaagacaattggcgtctggatggatctgaggac
aaaaaggattggaggaggactgctgctgacagtgaaattagccgccgctggcgtgaagag
gaaagagaaactggcttacttggtggtagaagagatcgtaggaaggctgagcgccgtgtt
gacaatgtctcaatgagagaaaccgtcgagagtagggcattgcctacctcggatcggtgg
catgatggtcgtaattctgggcatgaaacacggcgtgatagcaaatggtcttctaggtgg
ggccctgaggacaaagataaggaatcccgaactgagaagaggacagatctggagaaagaa
gatgctcacaatgacaatcaatcttttgtgggtagcaaccgttcagtttctgagcgtgat
tctgattctcgtgataaatggaggccacgccatagaatggaggttcattctggtggttca
aatgcctaccgtgctgcacctggatttggacttgagagaggacgagtagaaggttcaaac
atgggatttacccttggacgagggaggtcaaatgttgttgggagaggttcatctactggt
tccattggtgctgcagataaaagtgaaagtgtcccggggagaccaagccactctgttgat
tctttttgctacccaaggggaaagcttcttgacatatatcggaggcaaaagcttgatcca
tcttttacaattatgccagacgatatggaggaattagcccccattactgaagtaggcttt
atagaaccattggcttttgttgctcctgatgctgaacaggaggccatccttggtgatata
cggaggggaaagctcactagtagcgggatggtgtacagtttgtatagaaaggggagatca
actgaaaatgttacaggtgttgaagacttagactacactgagcaaaatcagggtatccta
ctcccaacttccaatgatgaggctgctgatacttcacaagaagctgcaactgatgatgca
tatcaagctgacgatgatggtaccttgtggaaatatagttccaagaggaatgcagtagat
gaaaaatatattaaagaagcaaaagttaatgttattggagcaatcaatgggctggaagat
ggattagccccaataatttcagaaagtaatggtgtctgtggtgccacagagattgatggt
gctcagcatagtgcttctcagatgaatattggtgaaaaatggcagatggcggattctgat
tttgccaaacatgttcagtttgatggcattgagttttccacttcatttgacctaagatcc
aaacttcccgatgattcaaattctctctttgttgtgccctctcctgagcagaatcaaagt
agaaacagtcaggcaaatgacttggatagggtagccccaccagaggagttaagtttgtac
tacgttgaccctcagggggtgacccagggaccatttgttggggctgacatcattttatgg
tttgaacaaggtttctttgggacagacttgccagtccgcttggcagatgctcctgaagga
acacctttccaagaattgggcaaggtattgccttacctgaaagtcaaagacggatatgac
aatagcactgaaccaaactctaagctagaacaatgtggtgcctttgaggaacagttggac
actagtttacctgcttctgcttctcttatggaaattaattcatcttcagtaaatgacctg
tgcccaacatcgactgagtttaacagcctttcagcacagcatgttcagtcaagagtatct
gagcctgaagtttcattacaactgccacattctgagggtcaaagcttccataagctcatt
acacaagacgaagaaattgtgtttcctggaagacctgcagacaagggatattctattgca
aaatcttctgggagcagtcgtcattctacagacaatcctatcagccacccttctcttcca
aatgaattgacagaacctggtgtatcaattcagaatgataataagttgcacccctttggc
ttgctctggtctgagcttgaaggtcatacaaaacatgcgaagtcatccgctccatccacc
atgggaagggctgctccatttggtgctatgggtgatccagctcttgctgcagagacgtgg
tctgatgtttataggaaaaatgctcatgttgaccccaacttgtatcaagatgccatggct
gctcgtcatttgtcactcatggaacaggaatccaaccattttgatttagcagagcagctt
atggcacaacaatttcagcagcagcagcagcagcaactccaacaacgatctatgttgtct
cctcatgcacacataaatgaatcagttttagaacatgtgcctactcagaatcttttacac
caacagttggccaatcgttctgccccagatttggatcatcttttgacacttcagctgcaa
cagcagcggcaaattcagttccaacaacaacatcaattgcatcaacagcagcagtttcat
caacagcaaaagcttttgcaggagcaaaagcttttgcaggagcaaaagattctgcaggaa
caaaagcttttgcaggaacaaaagcttttgcaggagcaacagcaatctcaagtccggcag
gtgcttcttgaacagttgtttcgaagtcaaatgcatgatcctggccttgggcagtcacat
gttgatccactcagagccaatcatcaggctgtattagagcagcttcttctacaagaaatg
caacaacggtctcatcatccttcaaggcataatgaaccatctttagagcagattatgcaa
gctaaatttggtcatatgccacaacaagatcatcagagagatttatatgagcttatatca
cgtgcacagcatggacatcagtcattggagcaacagcttcttcaacaagaccagctgcag
gccaggcagctgtcaatgggattgaggcagcggactaatattgaaggagaaaggcatatt
ggttctatgtggccagcagatgaatctgatcagtttctaaggactcatgctggtcctcac
cgaactcactcttcagggtttggcccaatggatgtttatcagcgacaacagaggccatcc
catgaggagcagctgaatcaacttgaaaggaatctttcatttcaggagcggcttcggcaa
ggtctttatgaccctagctcactgccatttgagcggtcagtttctatgcctgctggtgct
ccagggatgaatctggatgttctagctatggctcgtgctcatggtttggatatgcaggaa
tcaagtgcacgtatgcaatctgctggtcaagtgggtacattttcatctggcatccaccct
cataatccccatcatcctttgattcccaaccaatttcatggccctcaattggatgcaatt
gagggccgttggcctgagaacaatgagcagctagagaatgactggatggaatcccgggtt
caacaattgcatatcaatccagaacgtcagaaaagggagtcagaagttaaaatgacttct
agagatccaactttatggatgtcagaaggatttaatgatgagaagtcaaaacaattgttg
atggaattgctccatcagaaatcaggtcatcaatctactgagccattggaggtgggtaag
gaaacaagggcaccatctggcctttattctgggttaagctcctcagatcacccattcact
cttcgtctagaccgggaagcaggtctggataacacatttgcggtgggttcttatggttct
agttcatgcgaaccattacaggatgagcgggccaccagtttggagagcaatgaaataatg
ccgtttagatctgattctggatcattggtagagggagaattgcgcttggcaggcatcaat
gagactggtcaggcaatttatacaaactctaacatgatcagcaagtcgaatatgagcaat
gagttctctgaggctgaggggaggaagcatgggtctagaagtgagggtgtgatgaagggt
ccagcttttgagattcaggaaggcttggttgagcaagctgggttggctgctctagaccgt
ggggaaattttgattaatgcccttagcaggcagtcatcaattggttctgcaggtgggaaa
acaggattctacagtgacaaaattggtaattcatttgtggaggaggtttccaaagtttcc
aaagagcgggtgcctgttccattaaaagggcaagacaataatattttgctgagacgtcct
cctgtcccccacccatcatcatcacaggaaggattgtctgagctggtctcagatcaagtt
gcaagagggaaaatttcttctagtggtgcttctgatgggggaagacgagaacctggggtg
aatttattaagccaaggttcggacatcatggcatctggcaagaaagacatgcgattccgg
cgtacttcatcttttggtgatgctgatgtttcagaggcatcatttatagatatgctgaag
agtaatgcaaagaaaagtgcaccggcagagactcattcaacaacaggattttcagagaca
acagatggagcacaagggggacgaggtggcaaaaagaaaggtaaaaaaggaaggcaaatt
gatcctgctcttcttggtttcaaagtcactagcaatcgcatcatgatgggtgaaattcaa
cgcatagaggactag
DBGET
integrated database retrieval system
