KEGG   Quercus suber (cork oak): 112017704
Entry
112017704         CDS       T05868                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1 isoform X1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
qsu  Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:qsu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:qsu03041]
    112017704
Spliceosome [BR:qsu03041]
 Complex B
  Other components
   Complex B specific factors
    112017704
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 EIF3I WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 ANAPC4_WD40 WD40_MABP1-WDR62_2nd LisH_TPL NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_Nup120_160 Ge1_WD40 Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_SPT8 WD40_RFWD3 Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_VPS8 Beta-prop_HPS5 Beta-prop_NUP159_NUP214 DUF7165 Beta-prop_IFT122_2nd PROPPIN Mala_s_1-like Beta-prop_WDR75_2nd Beta-prop_IP5PC_F zf_topless
Other DBs
NCBI-GeneID: 112017704
NCBI-ProteinID: XP_023905925
LinkDB
Position
Unknown
AA seq 513 aa
MSFLEIEARDVIKIVLQFCKENSLHQTFQTLQSECQVSLNTVDSVETFIADINSGRWDAI
LPQVSQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEH
LLVRTYFDANEAYQDSTKEKRRAQIAQALAAEVTVVPPSRLMVLIGQALKWQQNQGLLPP
GTQFDLFRGTAAMKQDVDDMYPTTLAHTMKFGTKNYPESAQFSPDGQFLVSCSVDGFVEV
WDYISGKLKKDLQYQADERFMMHEDPVFCADFSRDSEMLATGSKEGKIKVWRIRTGQCLR
RLEHAHSGCVTSIVFSRDGSQLLSTSFDNTARIHGLKSGKMLKEFRGHSSCVNDAIFTTD
GNRVITASSDCTVKVWDMKTTDCLQTFKPPPPLRGGDASVNSVHLFPKNTDHIIVCNETS
SIYIMTLQGQVVKSFSSGKREGGDFVASCVSPKGDWIYCVGEDRNMYCFSYQSGKLDHLM
KVHEKGVTCVTHHPHRNLVATCSQDCTMKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtcgttcctcgaaatcgaagctcgagatgtgatcaagattgtgctccaattctgcaaa
gagaattctttgcaccaaacgttccagacgttacagagcgagtgccaggtttctttgaat
actgtggacagtgtggagacatttattgctgatattaatagcgggaggtgggatgcgata
ctgcctcaagtgtctcagctcaagcttcccaggaataaattggaggatttatatgagcag
attgtattagaaatgattgaacttcgagaattggatactgcacgtgctattttaaggcaa
actcaggcaatgggtgtcatgaagcaagagcagcctgaaagatatttgcgacttgagcat
ctcctagtcagaacttactttgatgcgaatgaggcttaccaagattcaacaaaagaaaaa
cggcgtgcacagattgctcaagctcttgctgctgaagttactgtggtcccaccttcacga
ttaatggttctaattggccaggctctgaagtggcagcagaaccaaggattacttcctcca
ggaacacagttcgacttatttcgaggaaccgctgctatgaaacaagatgtggatgacatg
tatccaactactcttgcacacacaatgaagtttgggacaaaaaattacccagaatctgct
caattctcgccagatggacagtttcttgtctcttgctctgttgatggctttgttgaggtc
tgggattacatcagtgggaagctcaagaaggatcttcagtaccaggctgatgaaaggttc
atgatgcatgaggatccagtgttttgtgctgattttagcagagattctgagatgcttgca
actgggtcaaaagaaggaaagataaaagtttggcgtataaggactggccaatgcttgcgt
cgtcttgaacatgcacattctggatgtgtcacaagtattgtcttctctcgagatggaagc
cagttactgagtacatcatttgacaacactgcaagaatccatggcttgaaatctgggaag
atgttgaaagaattccgtggccattcatcttgcgtcaatgatgctatttttacaactgat
ggaaatcgtgttatcactgcatctagtgattgcacagtaaaggtctgggatatgaagact
acagactgtctgcaaacatttaagccaccgcctcccttacggggaggtgatgcttctgtg
aattctgttcatcttttccccaaaaacactgatcacattattgtatgtaatgagacatcg
tctatatatattatgacacttcaagggcaggttgtaaagagcttctcatctggtaaaaga
gaaggtggagactttgttgcgtcctgtgtgtcaccaaaaggggactggatttactgtgtt
ggtgaagacaggaatatgtactgtttcagctatcaatctggtaaactggaccatctgatg
aaggtccatgaaaagggtgtaacttgcgtcactcatcatccacacagaaatcttgttgct
acatgcagtcaagactgcactatgaaattgtggaagccttga

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