Quercus suber (cork oak): 112020557
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Entry
112020557 CDS
T05868
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112020557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qsu04121
]
112020557
Ubiquitin system [BR:
qsu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
112020557
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
DUF7885
LRR_4
LRR_NXF1-5
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
112020557
NCBI-ProteinID:
XP_023908880
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MKMMMGSSFPEEVLEHVLSFIERDKDRNAISTVCQSWYEIERCSRRRVFVGNCYAVSPAI
LIKRFPDVRCLELKGKPHFADFNLVPEDWGAYVAPWIAAASSAYPWLEEIRLKRMVISDD
SLELISKSFKNFKVLVLSSCEGFSTVGLAAIAAKCRNLRELDLRESEVEDLNQSSGHWLS
HFPDNYTSLVSLNIACLNSEVSFPALERLVGRCPNLRTLRLNRAVPLDKLAILLRRAPQL
VELGTGEASDLRLDVSSRLDVSSNLLGAFSGCKELKSLSGFWDVAPGYLPYVYPICPSLT
SLNLSYAATIESSDLIKLVSRCQNLQKLWVLDYIEDLGLEALAASCKDLRELRVFPSEPF
GAEPNVLLTEQGLVSVSEGCPKLHSVLYFCRQMSNDALRTIARNRPNMTRFRLCIIEPRT
PDYLTLQSLDGGFGAIVEHCKDLRRLSLSGLLTDRVFEYIGTYGKKLEMLSVAFAGDSDL
GLHHILSGCENLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSFGACKLLGQKMP
MLNVEVIDERGPPGSRPESCPVEKLYIYRTVSGPRIDMPGFVWTKDKDSALGLS
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgatgatgggtagttcgttcccagaagaagtgttggaacacgtgttgtcattc
atagagagagacaaagacaggaacgcgatctcgaccgtgtgtcaatcgtggtacgagatc
gaacgttgtagccggaggagagtgttcgtgggcaactgctacgctgtcagccccgcgatc
ttgatcaagcggttcccggacgtgaggtgtttggagctcaaaggtaagccgcacttcgct
gatttcaacctcgtacccgaagattggggcgcctacgtggccccgtggatcgcggcggct
tcctcggcttatccttggctcgaagagattcggttgaagcgcatggtcatctcggacgac
agcttggaactcatttctaagtcgttcaagaactttaaggttctcgtgctttcttcgtgt
gaaggtttttcgactgtaggacttgctgccattgctgctaagtgcaggaatttgagagag
ctggacttgagggagagcgaagtggaggacttgaatcagtcgagtggacattggctcagc
cattttcctgataactacacctcactggtgtcccttaacattgcctgtttgaactctgag
gtgagcttcccagccttggaacgcctggtgggtaggtgccccaacctgaggactcttcgg
ctcaatcgtgctgtgccccttgacaagcttgcaatcctacttcgtcgggcacctcagttg
gttgagttaggcactggggaagcgtctgacttgcgactggatgtttcctcgagactggat
gtttcctcgaacctattgggggcattctctgggtgcaaagaacttaagagcctgtctggt
ttttgggatgtagccccaggttatctaccatatgtttatcctatctgtcctagcttaacg
tcgttgaacttgagctatgcagccactatcgaaagttctgatcttatcaagctagttagc
cgatgtcagaatttgcagaagttatgggtgctggattacattgaagacttgggcctagaa
gcccttgcagcatcttgcaaggatctgcgagaattgagggtatttccgtcagagccattt
ggtgcagaaccaaatgtattgttgacagaacagggacttgtctctgtttctgaaggctgc
ccaaagctgcattcagttctgtacttctgccgtcaaatgtctaatgatgccttaaggacc
attgccaggaatcgacctaacatgacaaggtttcgtctttgtattattgagccacggact
cctgattaccttacccttcaatcacttgatgggggatttggagccattgttgagcactgc
aaggatctaaggcggctttccctttctggtcttcttactgatcgagtgtttgagtacatt
gggacttatggcaaaaaattagagatgctgtctgtggcttttgctggagatagtgatctg
gggctccatcatatactctctggttgtgaaaaccttagaaaacttgagattagggactgc
ccctttggtgacaaggctcttttggccaatgctgcgaagctggagacaatgcgatccctt
tggatgtcttcttgctctgtgagtttcggagcatgtaagctgctaggtcagaagatgccg
atgcttaatgttgaggttattgacgagaggggccccccaggttcaagaccagaaagctgt
ccagttgagaagctctacatatataggactgtctctggaccaaggattgacatgcctggt
tttgtttggacaaaggataaagattctgcactggggctttcctga
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