Quercus suber (cork oak): 112020912
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Entry
112020912 CDS
T05868
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH7, chloroplastic
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
qsu03012
]
112020912
Enzymes [BR:
qsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112020912
Translation factors [BR:
qsu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
112020912
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
HA2_N
nSTAND3
AAA_19
AAA_22
ATPase
FtsK_SpoIIIE
SRP54
Motif
Other DBs
NCBI-GeneID:
112020912
NCBI-ProteinID:
XP_065621883
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MLKTRAALPIAALKGDILQLLKENNVLVVCGETGSGKTTQVPQFILDEMIESGCGGQCNI
ICTQPRRIAAISVAERVADERCEPSPGSDGSLVGYQVRLDSARSEKTKLLFCTTGILLRK
FAGDKNLTDITHVIVDEVHERSLLGDFLLIVLKNLIEKQSAHGAPKLKIILMSATVDSNL
FSRYFSNCPVITAEGRTHPVTTYFLEDIYESISYRVASDSPASIRNETSTNQRFQSGPIN
NRRGKKNLVLSAWGDDSLLSEDCINPYYSPSSYQSYSEQTQQNLKIVNEDVIDYDLLEDL
ICHVDETCDEGSILVFLPGVSEIYTLHDKLVASYRFGGPSSDWILPLHSSVASTDQKKVF
LRPPENIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWISQANAR
QRRGRAGRVKPGICFCLYTRNRFEKLMRPFQVPEMLRMPLVELCLQIKLLALGYVKPLLS
EALEPPREEAITSAISLLYEVGALEGDEELTPLGHHLAKLPVDVLIGKMMLYGAIFGCLS
PILSISAFLSYKSPFVYPKDEGQNVERAKLALLSDKVDGPSDQIDVDRQSDHLLMMTAYR
KWEKILHEKGVKAAQHFCSSYFLSGSVMYMIRDMRIQFGSLLADIGLINSPKKYQIDRRK
KENLGSWFSDASQPFNKYSHHSSVVKAILCAGLYPNVAATEQGIAGVALGSLKQSVGPVK
QGRSVWYDGRREVSIHPSSINSNLKAFQYPFLVYLEKVRTFIPCIHSCSYLSCPFPNIGS
MM
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaaactagagctgcacttcctattgctgctttgaagggtgatattctgcaacta
ttgaaggagaataatgttcttgttgtttgtggtgaaacgggctctgggaagacaactcag
gttccacaatttattttggatgaaatgattgaatcaggatgtggtggacaatgtaacatt
atatgcacgcaaccaagaagaatagcagctatttctgtggctgaaagagttgctgatgag
cgctgtgaaccttcaccaggttcggatggttctttggttggttatcaagtccgtcttgat
agtgcaaggagtgaaaaaacaaagcttcttttttgtactacgggcattcttctgagaaaa
tttgcgggggacaagaacttgactgacatcacgcatgtcatagttgatgaagtgcatgaa
cggtctctattgggtgatttcctactcattgttttaaagaatctgatagaaaagcaatct
gctcatggcgcaccaaaactgaaaatcatccttatgtctgcaactgtagattccaatttg
ttttccagatactttagtaactgccctgtgattactgcagaaggcagaactcatcctgtg
acaacttactttcttgaggatatatatgaaagcattagttatcgtgttgcttcagattct
ccagcttctataaggaacgaaacatccaccaatcaaaggttccagagtggtcccataaat
aaccgtaggggcaagaagaatcttgtcttatctgcatggggagatgattctctgctctca
gaagactgtattaacccctattattcgccaagcagttatcaatcatacagtgaacaaact
caacagaatttgaaaatagtgaatgaagatgttattgattatgatcttcttgaggaccta
atctgtcatgttgatgaaacttgtgacgaaggttccatacttgtattcttacctggggtg
tctgaaatttacacattacatgataagctagttgcttcttaccgattcggtgggccatct
tccgattggattcttcctttacattcatccgttgcatcaactgatcaaaaaaaagtgttt
ttacgtcctcctgaaaacatacgcaaggtcattatagctacaaacatagcagagacgagt
ataaccatagacgatgtggtatatgtcattgactgtggaaagcataaggagaatcgctat
aaccctcaaaagaaattgtctagcatggttgaagattggatatctcaagcaaatgcaagg
caaaggagaggaagagctggacgtgtaaaacctggaatatgcttttgcttgtatactcgt
aatagatttgagaaactcatgcgcccttttcaggttcctgagatgcttcggatgccacta
gtggagttgtgtttacagattaaattacttgctctgggttatgtaaagcctcttttatct
gaggctttagaacctcctagggaggaggctattacctcagcaatttcattgttatatgag
gttggggcacttgaaggtgatgaagagttgacacctcttgggcatcatttggcaaaactc
cctgtcgatgttttaattgggaagatgatgctatatggagcaatatttggttgcttatcg
cccattctctcaatttcagcatttttgagctacaaatctccatttgtgtatccaaaagat
gaggggcaaaatgttgaaagagcaaaattggcacttttgagtgataaggttgatggtcct
agtgatcaaattgatgttgataggcaatctgaccaccttttaatgatgactgcttatagg
aaatgggagaagattctgcatgagaaaggagttaaagctgctcaacatttttgcagttca
tattttttaagtggttcggttatgtacatgataagagacatgagaatacagtttggatcg
ttgctagcagacattggccttatcaactctccaaaaaaatatcagattgatagaagaaag
aaagagaatcttggcagttggttttctgatgcatcgcaaccattcaataagtattcacat
cattcatctgttgtaaaggctatactgtgtgcaggcttatatcccaatgtggcggccact
gaacaaggcattgctggagttgctcttggcagccttaaacagtctgttggtcctgtaaaa
cagggtcgttctgtttggtacgatggaaggagagaagttagcatacacccttcttctatc
aacagtaacttgaaagcatttcagtatcccttccttgtttaccttgaaaaggttcgcact
tttatcccatgtatccattcttgttcctacttgtcatgtccttttcctaatattggttca
atgatgtga
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