Quercus suber (cork oak): 112022394
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Entry
112022394 CDS
T05868
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu04120
Ubiquitin mediated proteolysis
qsu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112022394
04120 Ubiquitin mediated proteolysis
112022394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qsu04121
]
112022394
Enzymes [BR:
qsu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112022394
Ubiquitin system [BR:
qsu04121
]
Ubiquitin ligases (E3)
U-box type E3
112022394
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
112022394
NCBI-ProteinID:
XP_065635432
LinkDB
All DBs
Position
Unknown
AA seq
1037 aa
AA seq
DB search
MATPTAPRKPQRSPEEIEDIILRKIFLVSLTDSEPSDPRIVYLELTAAEILSESKELRLS
RDLMERILIDRLSASATAEPPFQYLIGCYRRAYDESKKISSMKDPNLRSQLDSVIKQAKK
LCVSYCRIHLGNPELFPNNEVKSGTSPLLQLVFSEVSSSLDGFGGSSSGGTQSLPGFLDE
FFRDSDFDTLDPILKGLYEDLRGTVIKVSALGNFQQPLRALLYLVNFPVGAKSLVNHLWW
IPKGIYLNGRVIEMTSILGPFFHVSALLDDSIFKTQPDVGQQCFSEASTRRPADLLSSFT
TIKTVMNSLYDGLSEVLLSLLKNTDTRENVLDYLAEVINLNSSRAQIQVDPISCASSGMF
VNLSAVMLRLCDPFLDANLMKRDKIDPKYVFHNNRLDLSGLTALHASSDEVAEWLNKKKL
GKTDGSTQHTDGENRLLQSQKATSSGSSASGSSNVKLASSSDKTKYPFICECFFMTARVL
HLGLLKAFSDFKHLVQDIQRCEDTLSTLKAMQEQTPTPALERDISRLEKEIELYSQEKLC
YEAQILRDGTLIQSALSFYRLMVVWLVGLVGGFKMPLPSSCPMEFASMPEHFLEDAMELL
IFASRIPKALDGVLLDDFMNFIIMFMGSPDFIRNPYLRAKMVEVLNCWMPRRSGSSNTAT
LFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWR
QIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWERRPAQERQER
TRLFQSQENIIRIDMKLANEDVSMLAFTSEQITAPFLLPEMVERVASMLNYFLLQLVGPQ
RKSLSLKDPEKYEFRPKQLLKQIVYIYVHLAKGDTENIFPAAISKDGRSYNEQLFSAAAD
VLRRIGEDGRVIREFIELGAKAKVAASEAMDTEAVLGEIPDEFLDPIQYTLMKDPVILPS
SRITVDRPVIQRHLLSDNSDPFNRSHLTADMLIPNTELKARIEGFIKSQERKKQGESLSM
ESAKVTIQTTNSEMLID
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcctactgctcctcggaaaccccaaaggtctccggaggaaatcgaagacatt
atcctccgtaaaatctttctggtttccctcaccgattctgaaccctccgatcctcgaatc
gtgtacctggagctaaccgcggctgagattctaagcgaaagcaaggaattaaggctctct
agggatctcatggagcgaatcctaatcgatcgcctctccgcttctgccaccgccgaaccc
ccctttcaatacctcatcggttgttatcgtcgcgcttacgacgagtccaagaagatttct
tccatgaaagaccccaacctcaggtcccaattggactctgtcattaagcaagccaagaaa
ttgtgcgtctcttactgtaggatccacttgggaaaccctgaattgtttcccaataatgag
gttaaatccggtacttcccccttgttgcagctggttttttctgaggtttccagctctctc
gacggctttggaggcagtagcagtgggggtactcaatccctacctggctttttggatgag
ttcttcagggattcagatttcgatacgttggaccccattttgaagggcttgtacgaagat
ttgagaggcactgtcattaaggtttcggccctcggaaactttcaacagcctttgagggct
ttgttgtacttggttaactttcctgtgggtgccaagtccttggtgaatcatctttggtgg
attcccaaaggcatttatttgaatggccgggttatcgagatgaccagcattttggggccg
ttttttcatgttagtgctctgcttgatgattctattttcaagacccagcctgatgtaggg
cagcagtgcttttcagaagcatcaactcgccgaccggctgatttgttatcttcatttacc
acaattaaaacagttatgaatagtttatatgatggcctgtcagaagttcttctctcgctt
cttaaaaatacggacacccgtgaaaatgttcttgattatcttgctgaggttatcaattta
aactcgtcaagggcacaaattcaggttgatcctatatcttgtgcaagttcaggcatgttt
gttaatctcagtgctgtcatgcttcggctgtgcgacccttttttggatgcaaacttaatg
aaaagggataaaattgatcccaaatatgtatttcataataaccgtctggatttaagtggg
ttgactgcgctccatgcatcatcagatgaagttgctgaatggcttaataaaaaaaaattg
gggaaaactgatggctctacacaacacactgatggtgaaaatcggttactacaatctcaa
aaggccaccagttctggcagtagtgccagtggatcttctaatgtgaagctagcatcaagt
agtgataaaactaagtacccatttatttgtgaatgcttctttatgactgcaagggtgcta
cacttgggcttattaaaagcattttctgactttaaacatttagttcaggacattcaaagg
tgtgaagatactctctccactcttaaagccatgcaagagcagactcctactcctgcattg
gagcgggacatttctcgccttgagaaagaaatagagttgtattcacaggagaagctttgt
tatgaagctcagatactaagggatggaacacttattcagagtgccctttctttctaccga
ttaatggtggtttggctggttggcttggttggtggatttaagatgcctctgccatcaagt
tgccctatggaatttgcgtctatgccagagcattttctagaagatgccatggaattgctt
atatttgcttcacgaatcccaaaagccttggacggggtcttgctggatgactttatgaac
tttattatcatgttcatggggagcccagattttatcagaaacccttatctcagggcaaag
atggttgaagtcctgaactgctggatgccccgtagaagtggctcatctaatacggcaact
ctatttgaagggcaccaactatctcttgagtatcttgtgaggaatcttctgaagctttat
gttgacattgagttcactggttctcacacacagttctatgacaagttcaacatccgacat
aatattgctgaacttcttgaatacctgtggcaagtccctagtcatcgtaatgcttggaga
cagattgccaaggaagaggaaaagggagtttatttgaatttcttaaacttccttatcaat
gatagcatctatcttcttgatgaaagtctcaacaaaattcttgaactcaaagagttggaa
gctgagatgtccaatactgcagaatgggagcgaagaccagctcaagagaggcaggagaga
acccggctattccaatcccaagagaatattatccggattgatatgaagttggcaaatgag
gatgttagcatgctggcatttacttcagagcagattactgctcctttcctacttcctgag
atggttgagagagtagccagcatgctcaattattttctgttacagcttgtgggtccccaa
cgaaaatctctttctcttaaagatcctgaaaaatatgaatttcgtccaaaacagttgctt
aagcagattgtctacatatatgttcatctggcaaagggcgatacggagaacattttccca
gctgccatttctaaggatggtcgatcatacaatgagcagttatttagtgctgcagcagat
gttcttcgaagaattggtgaagatgggagggtaatacgggaatttattgagctaggtgcc
aaggccaaagttgcagcttctgaggcaatggacactgaagctgttcttggagagatacct
gatgaatttctcgacccaattcagtacactctgatgaaggatccggttatattaccttct
tcaaggatcactgtagaccgacccgtcattcaaaggcatcttcttagtgataattcggac
ccttttaaccggtcacatcttacggcggatatgctgattccaaacacggaattgaaggca
agaattgaaggttttatcaagtcccaagaaaggaagaagcaaggggaaagtcttagcatg
gaaagtgctaaggtgacaatacaaacaacaaacagtgagatgttaattgattga
DBGET
integrated database retrieval system
