Quercus suber (cork oak): 112022507
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Entry
112022507 CDS
T05868
Name
(RefSeq) serine/arginine-rich splicing factor SR34A isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112022507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
qsu03041
]
112022507
Spliceosome [BR:
qsu03041
]
Common components
Common spliceosomal components
SR proteins
112022507
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
112022507
NCBI-ProteinID:
XP_023910886
LinkDB
All DBs
Position
Unknown
AA seq
324 aa
AA seq
DB search
MSNGACGARLTSRIALLCIIFYNLQVPNMSGRFSRTIYVGNLPSDIREWEVEDLFHKYGR
ILDIELKIPPRPPCYCFVEFDNARDAEDAIKGRDGYNFDGCRLRVELAHGGRGPSSSDRR
GSYGGGGGGGRSGDGGGGGGSRFGISRHSEYRVVVRGLPSSASWQDLKDHMRKAGDVCFA
EVSRDGEGTFGVVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYEGSPPRSRSRSRS
RSRSRSRSRSRSRSRSRSRSRSRSRSRSRSRSRSVRRDRSKSLERSISRSVSRSRSASPV
KPSRPRSRSRSRSGSPRQARSGSG
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatggagcttgtggagcacggctcacctcgaggattgctctcttgtgtataatc
ttctacaatcttcaagtgccaaatatgagtggtcgtttttctcgcacaatctatgtaggc
aacctgccctcagatataagagaatgggaagttgaagatctatttcacaagtatggccgt
atattagacattgaattgaagattccaccccgccctccatgttattgtttcgtggagttt
gataatgcccgggatgcagaagatgcgatcaagggtcgtgatggctataactttgatggt
tgtcgtttaagggttgaacttgcccatggtggtaggggtccatcttcaagcgatcgtcga
ggtagctatggtggtggtggtggtggtggtaggagtggtgatgggggagggggcggtggg
agccgatttggtatctcacgccattctgaatatcgagttgttgttcgcgggctcccttct
tctgcttcctggcaagatttgaaggatcatatgcgaaaagctggcgatgtatgttttgct
gaggtgtcccgtgatggtgaagggacttttggcgttgtggattacacaaattatgatgac
atgaaatatgctattcggaaacttgatgacactgaattcagaaatccttgggcaagagct
tatattcgggtgaagaaatatgagggcagtcccccaagaagtcgtagtagaagccgaagc
cgaagtcgcagtcgcagtcgcagtcgcagtcgcagtcgcagtcgtagccgtagccgtagc
cgtagccgcagccgcagccgtagccgtagccgtagccgaagtgtaagaagggaccggagt
aaatcattggagcggtctatttctaggtcggtatcaagatccagatctgcatctcctgtc
aaaccttccaggccaagatcaagatcaagatctaggtcaggatctccccgccaggcacgg
tctggtagtggctga
DBGET
integrated database retrieval system
